get the mapping information from nuID to RefSeq ID

Description

Get the mapping information (including mapping quality information) of nuIDs to the most recent RefSeq release. These information was kept in the IDMapping libraries.

Usage

getNuIDMappingInfo(nuID = NULL, lib.mapping)

Arguments

Details

The function basically return the nuID mapping information kept in the "nuID\_MappingInfo" table of IDMapping libraries (lumiHumanIDMapping, lumiMouseIDMapping, lumiRatIDMapping). For more details of nuID mapping, please refer to the help of corresponding IDMapping library.

Value

It returns a data.frame with each row corresponding to an input nuID.

Author(s)

Warren Kibbe, Pan Du, Simon Lin

Examples

	## load example data
	data(example.lumi)
	if (require(lumiHumanIDMapping)) {
		nuIDs <- featureNames(example.lumi)
		mappingInfo <- getNuIDMappingInfo(nuIDs, lib.mapping='lumiHumanIDMapping')
		head(mappingInfo)
	}