get.rank.combinations {fCI} | R Documentation

## fold change values

### Description

identify the fold change value indexes beyond the fCI estimation

### Usage

      get.rank.combinations(rank.index.to.be.removed, symmetric.fold)

### Arguments

`rank.index.to.be.removed` | a list of integers representing the genes to be removed because it exceeds the predefined fold change, i.e 1.2 fold
`symmetric.fold` | a boolean value indicating the upregulation and downregulation are treatedly equally

### Details

TBD

### Value

`combinations` | a data frame of gene indexes

### Note

TBD

### Author(s)

Shaojun Tang

### References

http://software.steenlab.org/fCI/

### See Also

TBD

### Examples

      rank.index.to.be.removed=list(sample(1:100, 20))
      symmetric.fold=TRUE
      get.rank.combinations(rank.index.to.be.removed, symmetric.fold)

[Package fCI version 1.18.0 Index]