f5009b0cc7fcb0b14eec0aada5fb85f0 *CITATION
cd41f0c49c66be1105448b57e4c77360 *DESCRIPTION
3f2fa3941a2079195ad59f54c120133c *INDEX
ec3da75a012109622765c53263febbe7 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
0e0287ffc2cbf30c75749e573c2abf49 *Meta/hsearch.rds
1ff8badc3a375bf37b170e7c5ce680aa *Meta/links.rds
ad39d49adc00fc55169fde62f7135f53 *Meta/nsInfo.rds
b35b0cd51c74714324b046a83d35b83d *Meta/package.rds
4cd52523cc5b84838bb778a3774855b0 *Meta/vignette.rds
c377af424b4a4a4f18555630c03eb057 *NAMESPACE
79064ed32e48ac2f74536eecf47ef758 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/diffHic
cfd29c0a076f5ba47c85bdd0d935f5ce *R/diffHic.rdb
9f546aaea96206bc8a4b7fa2f3504beb *R/diffHic.rdx
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8c7f7ad73d862c104dea43c0a01d1f9c *doc/diffHic.pdf
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869d5340f7893fa3c5f132bf776c7600 *exdata/cuts.rds
beece61b4f038a89e2c1e7c01d1602ef *exdata/generator.R
3bc4511ce1aab325d07a2f152d2158f6 *exdata/hic_sort.bam
60c786471d4f676eb5d7f9b56a105bc9 *help/AnIndex
d6c4621df0961cb0cc81d491d949993c *help/aliases.rds
6fdf289306e40186ee1458d24a40936e *help/diffHic.rdb
4bf36d04a6c0b784d9cd6eda9d9d2518 *help/diffHic.rdx
5e94012ff689884cc14df865ec8a2930 *help/paths.rds
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e161ade6174e38bfe6cc160aef37f9cc *html/DNaseHiC.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5405917a2a513ec023fac32ac92aa57b *html/annotatePairs.html
dfbf6e59c1d2ccc15120f577b6d4f2b2 *html/boxPairs.html
509157fb624417fbe5fb6215614f798a *html/clusterPairs.html
497f73062742ba5af816e7134b8f3cb6 *html/compartmentalize.html
66db5f6daccaac33b392afedd3816ef1 *html/connectCounts.html
1b8c6d79da96d56a5dac50a4c30071c1 *html/consolidatePairs.html
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4ce6fd4f4e27d1e32c1a7667e3932b2c *html/diClusters.html
11a21c71f7e5233f19d6dd8a3b785fea *html/diffHicUsersGuide.html
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164d83f24affbb999ff111131ffd4aa3 *html/enrichedPairs.html
df6d77f8b94fb432fddc71a2bbb613e7 *html/extractPatch.html
d0310d572e11129936b858108b29027c *html/filterDiag.html
2b5dac11c27f0580c7008b38b17c4f49 *html/filterPeaks.html
efa9f85851590bb2fdcc4d6092aafce4 *html/filters.html
3c475349db0a92685f130d4591ea15ce *html/getArea.html
743d94c897c2d692909bd1669650ef48 *html/getPairData.html
5fc8774fc2a7b1798f0fcbf76b427066 *html/loadData.html
437f59b2691742ed851e9f0f9620546a *html/marginCounts.html
5ba287f5ad2311f716b6b68096145d28 *html/mergeCMs.html
9ec56a9cca159bf33ca5f177c3a58e28 *html/mergePairs.html
8d7f8b6fbefd72836d73d9261f03c61a *html/neighborCounts.html
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e207f0651fa29480cff719f49b857dc9 *html/pairParam.html
920d930dddab0cdd9f24f165082c9d1e *html/plotDI.html
8734fa0715b613ebd6bb70cdaef103ca *html/plotPlaid.html
4c4e020ab332b38337bd9a1c56211e57 *html/preparePairs.html
61ec800b1967ba5deba6589377da86e7 *html/prunePairs.html
bef87c701cccf97a15702c8684aa4387 *html/readMTX2IntSet.html
7eeea44488df3c663148440513da7428 *html/savePairs.html
ffae80d80d039abeddf1f71137debcd9 *html/squareCounts.html
7e139cc50f5d731ef4fc958b11b2196e *html/totalCounts.html
63aec8fcaf7edd630347106ebfc0514b *libs/i386/diffHic.dll
a4aa12b7b2742aaa3f7a97e4a401b38a *libs/x64/diffHic.dll
2e668d0500a9863b1cadfcc1063891a0 *python/iter_map.py
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c7902ad6c0e56849a55ba3f34b2b54b1 *tests/run_all_tests.sh
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3a2f6bb068c66c4eeabf10287512f7cb *tests/simsam.R
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52af1d2fd21f17a8d46b6f1552cfafa8 *tests/test-prune.R
5c86d72a6d35f0c4b844ade844837ed3 *tests/test-prune.Rout.save
