ConvertedIDgenes        Get interacting genes inside pathways.
GE_matrix               Get human KEGG pathway data and a gene
                        expression matrix in order to obtain a list
                        with the gene expression for only pathways
                        given in input .
GE_matrix_mean          Get human KEGG pathway data and a gene
                        expression matrix in order to obtain a matrix
                        with the mean gene expression for only pathways
                        given in input .
GOChord                 Displays the relationship between genes and
                        terms.
GetData                 Get general information inside pathways.
GetPathData             Get genes inside pathways.
GetPathNet              Get interacting genes inside pathways.
IPPI                    Multilayer analysis Cava et al. BMC Genomics
                        2017
SelectedSample          Select the class of TCGA data
StarBioTrek             Download data
average                 For TCGA data get human pathway data and
                        creates a matrix with the average of genes for
                        each pathway.
circleplot              Preparation for circle plot
dsscorecrtlk            For TCGA data get human pathway data and
                        creates a measure of discriminating score among
                        pathways
eucdistcrtlk            For TCGA data get human pathway data and
                        creates a measure of cross-talk among pathways
getNETdata              Get network data from GeneMania.
listpathnet             Get human KEGG pathway data and the output of
                        list_path_net define the common genes.
pathnet                 Get human KEGG pathway data and creates a
                        network data.
plotcrosstalk           Preparation for plotting cross-talk
select_class            Select the class of TCGA data
stdv                    For TCGA data get human pathway data and
                        creates a measure of standard deviations among
                        pathways
svm_classification      SVM classification for each feature
