assignments |
data.frame with cluster assignments
containing the columns "unit" (name of the observational unit; either a
gene name or a spot name), "resolution", "cluster", and "name" (a
unique identifier of the (resolution, cluster) pair).
|
clusterMeans |
data.frame with columns "name",
"resolution", "cluster", featureName, and "mean".
|
scores |
data.frame with cluster scores for each
spot in each resolution containing the columns "spot", "resolution",
"cluster", "name", and "score".
|
colors |
vector of colors for each cluster. Names should match the
"name" columns of the assignments and scores.
|
image |
background image for the array plots, passed to
grid.raster.
|
coordinates |
data.frame with rownames matching
the names in scores and columns "x" and "y"
specifying the plotting position of each observation.
|
featureName |
character with the name of the
clustered feature.
|