* example.bam:
Formalin-fixed paraffin-embedded (FFPE) sample. example.bam was sub-sampled from project 
PRJNA301548 of the European Nucleotide Archive (ENA) (https://www.ebi.ac.uk/ena/browser/view/PRJNA301548)

* example.bam.bai:
The index was generated using SAMtools.

* example.fasta:
Small example regions of 24 chromosomes from human hg19 reference genome.

* PhredScoreProfile1.txt and PhredScoreProfile2.txt:
Examples of Phred score profiles generated by the function estimateSimParam of this 
package (with read length of 100 and 150 bp).

* regionsBam.txt and regionsSim.txt
Regions covered by the example.bam and exonic region examples of the example.fasta.


