| SNAGEE-package {SNAGEE} | R Documentation |
Signal-to-Noise Applied to Gene Expression Experiments
| Package: | SNAGEE |
| Version: | 0.99.0 |
| Date: | 2012-01-26 |
| Depends: | R (>= 2.6.0) |
| Imports: | SNAGEEdata |
| Suggests: | ALL |
| Enhances: | parallel |
| License: | Artistic-2.0 |
| URL: | http://fleming.ulb.ac.be/SNAGEE |
Index:
qualStudy Quality of a study qualSample Quality of samples in a study toSnageeFormat Turns an Eset to a list usable by SNAGEE
David Venet <davenet@ulb.ac.be>
Maintainer: David Venet <davenet@ulb.ac.be>
# Get the list of genes geneList = getCC()$g; # Create a random data set d=list(genes=geneList, data=matrix(rnorm(length(geneList)*50),ncol=50)); # Calculate its quality (it's going to be very close to 0) qualStudy(d, disattenuate=FALSE); # Calcuate individual sample qualities qs = qualSample(d);