print.SBGNview {SBGNview}R Documentation

A wrapper to run function renderSbgn for all pathways in a SBGNview object and generate image files.

Description

A wrapper to run function renderSbgn for all pathways in a SBGNview object and generate image files.

Usage

## S3 method for class 'SBGNview'
print(x, ...)

Arguments

x

An object of class SBGNview

...

Other parameters passed to print.

Value

None

Examples

### use simulated data. Please see vignettes for more examples
data("pathways.info","sbgn.xmls")
SBGNview.obj = SBGNview(
              simulate.data = TRUE
              ,sbgn.dir = "./"
              ,input.sbgn = "P00001"
              
              ,output.file = "./test.local.file" 
              ,output.formats = c("pdf")
              
              ,min.gene.value = -1
              ,max.gene.value = 1
            )
 print(SBGNview.obj)
[Package SBGNview version 1.2.0 Index]