| installTCGA {RTCGA} | R Documentation |
Function installs data packages from https://github.com/RTCGA/. Packages are listed datasetsTCGA.
installTCGA(packages = c("RTCGA.clinical", "RTCGA.mutations", "RTCGA.rnaseq",
"RTCGA.RPPA", "RTCGA.mRNA", "RTCGA.CNV", "RTCGA.miRNASeq", "RTCGA.PANCAN12",
"RTCGA.methylation"), build_vignettes = TRUE, ...)
packages |
A character specifing the names of the data packages to be installed. By default installs all packages. |
build_vignettes |
Should vignettes be build. |
... |
Further arguments passed to install_github. |
If you have any problems, issues or think that something is missing or is not clear please post an issue on https://github.com/RTCGA/RTCGA/issues.
Marcin Kosinski, m.p.kosinski@gmail.com
RTCGA website http://rtcga.github.io/RTCGA.
Other RTCGA: RTCGA-package,
boxplotTCGA, checkTCGA,
convertTCGA, datasetsTCGA,
downloadTCGA,
expressionsTCGA, heatmapTCGA,
infoTCGA, kmTCGA,
mutationsTCGA, pcaTCGA,
readTCGA, survivalTCGA,
theme_RTCGA
## Not run:
installTCGA()
installTCGA('RTCGA.clinical')
## End(Not run)