Fasta file with forward reads

Description

Fasta file with forward strand reads. Toy data used to illustrate the intersections of forward and reverse haplotypes with the function IntersectStrandHpls.

Format

Fasta file format. Each sequence starts with the symbol ">" followed by the sequence ID. Subsequent lines correspond to the nucleotide sequences or peptide sequences.

See Also

ToyData_RVReads.fna, IntersectStrandHpls

Examples

filepath_FW<-system.file("extdata","ToyData_FWReads.fna", package="QSutils")
lstFW <- ReadAmplSeqs(filepath_FW,type="DNA")
filepath_RV<-system.file("extdata","ToyData_RVReads.fna", package="QSutils")
lstRV <- ReadAmplSeqs(filepath_RV,type="DNA")

lstI <- IntersectStrandHpls(lstFW$nr,lstFW$hseqs,lstRV$nr,lstRV$hseqs)
lstI