MaskedModString objects

Description

The functions are implemented as defined in the Biostrings package. Have a look the MaskedXString class.

Usage

## S4 method for signature 'MaskedModString'
seqtype(x)

Arguments

Value

a MaskedModString object.

Examples

# Mask positions
mask <- Mask(mask.width=5, start=c(2), width=c(3))
mr <- ModRNAString("ACGU7")
masks(mr) <- mask

# Invert masks
mr <- gaps(mr)

# Drop the mask
masks(mr) <- NULL