7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
23fb848074911b070b8d26e3284ced0b *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
d60cc55e257241616628fe9ce466e857 *Meta/Rd.rds
a209d705d55e11fcf16f961825e4599c *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
188d45f6cc17f10dc3d9625afed365d1 *Meta/hsearch.rds
cebda02820847499ec990e5400d8ca6a *Meta/links.rds
86b5e72600dd64471d1ffc4c1de038d1 *Meta/nsInfo.rds
37175346170df3bbe122b728e3944e71 *Meta/package.rds
cff6c67fe98522a4c633ce799c3d7f40 *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/MADSEQ
69f6f97096b936bffe2f248b331c52e4 *R/MADSEQ.rdb
3c76273b18633501ea1c9bc2779e3b5e *R/MADSEQ.rdx
0cec22fd720491d2066dbb0c006e0cfb *data/Rdata.rdb
7c529c1ef6776505b96193aee3aa541b *data/Rdata.rds
2a46ba1994be2972474e62a37219ce41 *data/Rdata.rdx
2e4ebc6fc3af0ce1c2907f9548d8e0af *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
98a16f4bdf152d8b367318d3818008fd *doc/MADSEQ-vignette.html
8d2a12cbcba7e2d17c0a7f5e2ce7d491 *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
cbd8c7e5f14511b8613acbc128a3d27d *help/MADSEQ.rdb
7896e70066c1a36618911d1ad5682eb0 *help/MADSEQ.rdx
0064ab6bb75e14901c4be07c8989482f *help/aliases.rds
3c575a64622d4e1aa6b94207e34cc81d *help/paths.rds
735790c1d97050a8f616e80bc0250482 *html/00Index.html
e3bce218fa91ef3f80957e82a01aa270 *html/MADSEQ-package.html
9bc02bbfa2b466f8a1391f9ad459d7f3 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
df8cb204d71bf16ce1d091ed5d2da85b *html/aneuploidy_chr18.html
940a8ecfd801e5d6088ac806618e4c48 *html/deltaBIC.html
8ea146cd0eebe9ed087f9f20f3d59702 *html/normalizeCoverage.html
d7b888a32082a4bd308d14ad673ba7d6 *html/plotFraction.html
eccd62a1b96e866103889c5af43c8b87 *html/plotMadSeq.html
648cc9f895634a05dddb7f34221dce57 *html/plotMixture.html
3912933794b772c6c77a8021f1fd0830 *html/posterior.html
ff1d9b15cc10341e8de32a864afa1e23 *html/prepareCoverageGC.html
107334ffaeebc45426b027f952cd7a5d *html/prepareHetero.html
3ceb3b882331c263ae7a5446008c5247 *html/runMadSeq.html
5ba12c22f726acbcf83e9202f54de285 *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
