5b33056f014a0a068f8ad0f5a4c5204b *CITATION
35cd92540a5968ef0e8ccfe3aa576a0a *DESCRIPTION
1a304282a00f7af3da624cc07738fa91 *INDEX
4ebb7c51983dd8123c87b2ebab1dc3d5 *LICENSE
85a6f98686a0cb67585feb16f0ee9861 *Meta/Rd.rds
2a7619500d9c8cba4cdd6d1818c095fc *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c3eb7e852670cc2dc2c3a8d8e3a1943c *Meta/hsearch.rds
0ce37e0344fd51120243ea45e03ae603 *Meta/links.rds
75993ca7ad577e1021e17e5e926b8b6b *Meta/nsInfo.rds
0a3a5a2176e9fd1c67a6f97d11a106d2 *Meta/package.rds
77746f0879380e16e3ab8123b20eafe8 *Meta/vignette.rds
0e1a2261ee93d896b9c08864bbec03ed *NAMESPACE
a11ddf6f4c57ed4402e9a8111ea8424a *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/LedPred
c3ca2e666f9d78df60de242f7ba254e0 *R/LedPred.rdb
df67eed0879c01d0177f1231e150401d *R/LedPred.rdx
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df66a06f8f630efca0b7ce5dc9dad4fe *data/Rdata.rdx
4335ca5f6b23161df4a55569bb9ffbee *doc/LedPred.R
6853fe0e2a4f971ee89c254cd0b249a0 *doc/LedPred.Rnw
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c558e4cf9e8aedf723147f9fe2ceb677 *extdata/259_matrices_lightNames.tf
cd71944c6056e4e08356a47355c149c1 *extdata/2nt_intergenic_droso.freq
7dcf59f7dd722ec4d7bef6cafb36dca1 *extdata/negative_50CADenhancers.bed
75a8ddc57992993ef5e1f80ff80246f9 *extdata/ngs/K4me1_E_F_6_8h_H3_subtracted_reduced.wig
304c3f398c2ad03c716c298dbf22db30 *extdata/ngs/docBoundCRM.bed
1eba9725f6fcb3916311ca1bad6bdf2a *extdata/ngs/dtcfBoundCRM.bed
4cb035fd20f6998a70718703cfc46d25 *extdata/ngs/pmadBoundCRM.bed
4db52dc4f090a36c36f9e3d87858adbd *extdata/ngs/pnrBoundCRM.bed
5e2a74a85b052a3ab2170c6b046b2017 *extdata/ngs/tinBoundCRM.bed
ce900ac5571372ce554f13dda942a5c6 *extdata/positive_50CADenhancers.bed
2b418f42380ef5f9a0ea6480b4f10753 *extdata/prediction_small.bed
dd7685a68986a97e1518545b58f3097e *extdata/testdata/230NonActivesEnhancers4_8h_2seqs.bed
e73ac88451ae16a5ac8e46547c18f7a7 *extdata/testdata/23From66ActiveEnhancersInMesoAt68h_2seqs.bed
48a24b70a0b376535542b996af517398 *extdata/testdata/feature_nb.txt
a97ef38597cdeb98e3d7c75bf9897703 *extdata/testdata/feature_rank.txt
b7d8d9ed8be8a11f0d16efc127510796 *extdata/testdata/test_ngs_bed_small/mfile2.tf
23e7f287fc5fc81d8f4ddd88d02efb0d *extdata/testdata/test_ngs_bed_small/negative_5seqs.bed
6a0ac84a944bdb3e041c7edaa8a53452 *extdata/testdata/test_ngs_bed_small/ngs_beds/ngs.bed
98c3f9fe9d9744335b7fbfcfc1be23d3 *extdata/testdata/test_ngs_bed_small/ngs_beds/ngs2.bed
ef449589142ba89e530b860ffec157ae *extdata/testdata/test_ngs_bed_small/outdir_bak/feature_matrix.tab
4f88ad9538aeda9c1856d6cca75fc19b *extdata/testdata/test_ngs_bed_small/positive_2seqs.bed
911083bc4ec038f411fc3f51bef7fe9b *help/AnIndex
b04ab3c79f9c4de279aa7683f9efee58 *help/LedPred.rdb
c47512e1910c2546b676197880a1001f *help/LedPred.rdx
5087e6276bcaac12e2b50bcf27e84cb3 *help/aliases.rds
28e58c47d0e22c5fa741633c30230895 *help/paths.rds
6ef1c420f8cedc7afd150edfb88aaf82 *html/00Index.html
5e0f9c7a08c1ae430536b14fd3b84ba3 *html/LedPred.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
30f20a68d1d97dc39c722745c013ab1a *html/createModel.html
b0400844c5ec37f9f5256d477c4ffa71 *html/crm.features.html
38704f832bde38dd7db0a809ed38e5b9 *html/evaluateModelPerformance.html
33c92634acd30b78b5a40ae32b8c4a32 *html/feature.ranking.html
e0e8e8d8a91bbd8acc0db3ccb05d87d6 *html/mapFeaturesToCRMs.html
6e49aa5a7055c8970fe24adad8f74e76 *html/mcTune.html
f8740a9184bdf338aa26bb75d9744065 *html/rankFeatures.html
e68b0bfe3d1fed094624844408c461a1 *html/scoreData.html
841c77891e6ca82e298606fb1258dd2c *html/tuneFeatureNb.html
