# Generated by roxygen2: do not edit by hand

export(convertToGRanges)
export(convertToGeneAnswers)
export(convertToRangedSummarizedExperiment)
export(doEnrichment)
export(getDatasets)
export(getGeneIds)
export(getModel)
export(getRelease)
export(getTemplateQuery)
export(getTemplates)
export(getVersion)
export(getWidgets)
export(initInterMine)
export(listDatasets)
export(listMines)
export(newQuery)
export(runQuery)
export(setConstraints)
export(setQuery)
export(simplifyResult)

exportClasses(InterMineR)
exportMethods(runQuery)
exportMethods(summary)
exportMethods(getName)
exportMethods(getDescription)
exportMethods(getSelect)
exportMethods(getOrderBy)
exportMethods(getWhere)

import(Biostrings)
import(GenomicRanges)
import(IRanges)
import(RCurl)
import(RJSONIO)
import(S4Vectors)
import(SummarizedExperiment)
import(XML)
import(httr)
import(methods)
import(sqldf)
import(xml2)

importFrom(igraph,graph.data.frame)
importFrom(igraph,shortest.paths)
