687b621b197814c59b1892bcdd1308ca *DESCRIPTION
36e9cdb7b00a09aff787028035da87e8 *INDEX
aab1a1a690350b2cafe0aa22ee226218 *LICENSE
051e1c4f7017297c45703313288cc743 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
d654541d149d69c6c2be362a69729d43 *Meta/hsearch.rds
f4720c2d499c271d2666e9116daa3e7b *Meta/links.rds
6166355e844e2064e0d00952e23dd021 *Meta/nsInfo.rds
008c5821b59879a83ba7b0192efb61e3 *Meta/package.rds
420ab0275b00da141695257ca1cd25c9 *Meta/vignette.rds
168ebfab71a76fab29dffd78ae64b4b7 *NAMESPACE
e5b46e94fec5fe30da73f727cf97644e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GeneStructureTools
1ea815fce1aa5b09302e0b55b5d46a2b *R/GeneStructureTools.rdb
fef83ad59eb66378efd6632febbac29e *R/GeneStructureTools.rdx
68c89b782ef6faea31d18e6081cf32b8 *doc/Vignette.R
a986096c2549236e38c331c1eb88d14f *doc/Vignette.Rmd
54d8584a517b572fdf4871e72746d5a8 *doc/Vignette.html
542839b3e9e3893d67c2321bebd1b96d *doc/index.html
a9ba88162c20eddfc11c351d92fdcd09 *extdata/dexseq_process.R
96640b2e1735a4a23445a79154a89427 *extdata/dexseq_results_significant.txt
21a6c46d6193261e7bbcf4c7e1849f61 *extdata/example_gtf.gtf
c500de5992f92ebc83581899338c6d87 *extdata/gencode.vM14.dexseq.gtf
b28e8fedfee20f988113945166d52e0d *extdata/leafcutter/per_intron_results.tab
962287f8f3daaaae762c5f2eb8ab6267 *extdata/leafviz2table.R
d340f2509b1c4e1ccc74ed9e3b7799a0 *extdata/whippet/01_v_21.diff.gz
a751ff8f2e7f44be9fafbcedf6380afc *extdata/whippet/A01.jnc.gz
14fc894210fd1272e528613d72c5827b *extdata/whippet/A01.psi.gz
4bb796ee52ba3c7bff0733fd152de391 *extdata/whippet/A21.jnc.gz
bab86c79e977dd697ad0fdf037e2575d *extdata/whippet/A21.psi.gz
a64605c248ed60f04f1d5dfc334f181d *extdata/whippet/B01.jnc.gz
44c88c32417f2146e5e1a394243531be *extdata/whippet/B01.psi.gz
1210ab94aae2149703812243434a9883 *extdata/whippet/B21.jnc.gz
63b0451eca429697512091dbe65874cc *extdata/whippet/B21.psi.gz
f0e50ed69a8762a0c858c1b759ec7294 *help/AnIndex
c46e16d902ab721577386327723fe1ad *help/GeneStructureTools.rdb
41c4eab9c934470e445505abc3a289a5 *help/GeneStructureTools.rdx
4253155ba1eea2ba0f70ee0ffb7b07b0 *help/aliases.rds
c10e83db9eb31d1639a2317b6ac03f0d *help/paths.rds
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e6e011ccd1c64174447b00f1462ed628 *html/DEXSeqIdsToGeneIds.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
382149a9284689ba1192dc26cd0a10bc *html/UTR2UTR53.html
15b0cbbdfb833e6df32f0b67829ad0df *html/addBroadTypes.html
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29441e183e11e86bef1b660a762f8058 *html/addSets.html
6b9bf746ff63222727398bb195c53d1e *html/alternativeIntronUsage.html
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91c9e9da9d9eb31f4ad1b2a3f109fd17 *html/attrChangeAltSpliced.html
5e4ad2ce384f3422fb6b05cb9f1f34cc *html/coordinates-methods.html
527af903c930e04372c7a671a7367270 *html/cumsumANDpad.html
275053780ab50480babd2369fda48d2f *html/diffSplicingResults-methods.html
98f75b6a480d03bd234aebe964c697cf *html/exonsToTranscripts.html
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056eb004e136f9656d00aa2af7dfdbf9 *html/filterWhippetEvents.html
9fdfeda711cbd75ef165a56a7cad6340 *html/findDEXexonType.html
bb1918a92fb8b342fbc541686ffdd1a4 *html/findExonContainingTranscripts.html
c69d2b6c19305f53d2a88612c968a2f7 *html/findIntronContainingTranscripts.html
05b06354a9571c7364c4c2d89cffd9a6 *html/findJunctionPairs.html
aff799b7dba4ed86c1cf3527aeb6e1e9 *html/formatWhippetEvents.html
a45b773b20f60dc07ac5a37d7799ded9 *html/getOrfs.html
32c1b1cb92d8380b770a65a29e6fb4f0 *html/getUOrfs.html
592b5ded37d76c4d651afb4fb37886e5 *html/junctions-methods.html
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15fa373c11a3517c80449cf495f907f4 *html/makeGeneModel.html
806fc02ec38fa89370dd002a77e2fa36 *html/maxLocation.html
00d4add280975305e9573a616e29aa4e *html/orfDiff.html
e6b2bb81565546d1d3a9891ebad819e5 *html/orfSimilarity.html
4d9403b3ab1603193521c19b2fa51601 *html/overlapTypes.html
fb490303b87d15a1ec8cb22a0c1a92f5 *html/readCounts-methods.html
3ddac16c66811a98727e31109a0036b8 *html/readWhippetDIFFfiles.html
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2e3e501c0bae6cf96d6ff67ef7483f24 *html/readWhippetJNCfiles.html
4d894cb1c28d000dc3731426725354e8 *html/readWhippetPSIfiles.html
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4e49968cd38b7934460f23bddf459d02 *html/removeSameExon.html
36debd4ddf3b4ce1dba88a2940061c6f *html/removeVersion.html
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3f9433272838f1d2bf3826b89598b915 *html/summariseExonTypes.html
5a175ea50c609805c5be5234c9b973ad *html/transcriptChangeSummary.html
15d4b2280e4847afda709fffe5f84c53 *html/whippetDataSet-class.html
8874b5ef91bd3c7f5828a7315f86e3f1 *html/whippetTranscriptChangeSummary.html
