1b4981b647474af86398a7f4883175f7 *DESCRIPTION
9edecc22e8a58a99e24ef228c8c0e5c1 *INDEX
8864fda5890a42cd4f8a5abd55b645bd *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c14a95abfb494ba7f4e39039e30ad99b *Meta/hsearch.rds
97947e27c88e6baf4f536ad1ed0c9868 *Meta/links.rds
fad74f1160e305e2955bf839f1072234 *Meta/nsInfo.rds
ce394aae0de26d6528f981ddbe207bca *Meta/package.rds
a82f08ea64d55365d918d4bc4108b838 *Meta/vignette.rds
94aae69bff0e78031fe9d832370fbaf4 *NAMESPACE
6e87938fd077ec5c682f85cf5510b5f3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/FindMyFriends
33e9f8b6be50ff789059d82f4da5b85c *R/FindMyFriends.rdb
115ef0eedea1783a572b02eec3fec0f7 *R/FindMyFriends.rdx
4f309ceb4c768ebfa3c59894231e791b *doc/FindMyFriends_intro.R
f81e3e59a6933dd142a3816763cef4dd *doc/FindMyFriends_intro.Rmd
ec1858d5ed79ea069dc42c52c4a5b817 *doc/FindMyFriends_intro.html
8d19751bcdc17fdbdbff53bcf1ee2e60 *doc/index.html
fa46e1011a04ec09310d7e0e02add746 *extdata/Mycoplasma.zip
1e5bee3f07405b335c2b85b200524867 *extdata/examplePG/example.annot
915ea4715c2f07af1daa3f0299dbb858 *extdata/examplePG/groupsNS.txt
4ab5ee4efeaade14d15df92b1eb04020 *extdata/examplePG/groupsWG.txt
6b8fa4249be53ba59699e82260b97d61 *extdata/examplePG/paraNS.txt
b9fb498e4ff448e0d2f9b3ce9a4df4f2 *extdata/examplePG/paraWG.txt
4d3d4c9cb4a952dc86ef25e5c5189ce4 *help/AnIndex
9757942d96da351d0a3a542d1e82218d *help/FindMyFriends.rdb
28aa12725158938ad380eb144c34ea19 *help/FindMyFriends.rdx
4af4724937bcb6b59f5e4a7d6264c9c0 *help/aliases.rds
7a1f3308e525ad8b6c1012eeb5f37d11 *help/paths.rds
4ec173a35440d682b7a9bf784fd012a2 *html/00Index.html
a29b2d986a0cedc9ff7f72b437e8329e *html/FindMyFriends-package.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
e49b9be4d7f5e5ae188903eba19c935c *html/addGenomes.html
35c6c78d55563781d054e7f0401efbd8 *html/addGroupInfo.html
97aba371c1122c027c5c3eba4c839a19 *html/addOrgInfo.html
9d93ea7ee8d3ef5316e4e7aec4096176 *html/cdhitGrouping.html
d073ff05d2a4fa22885eeb655f9a8757 *html/collapseParalogues.html
9507c69b311b4df3c862e6a79539ceef *html/defaults.html
a55c7b4bb2efe3d22918dbfe3a3d9bf5 *html/fillDefaults.html
6a8c2bfc894f7a8e6b320fadd8c05a51 *html/geneLocation.html
f5e16923d86616b5518fa6a772b19e5e *html/geneNames.html
3c02ffe78d0bac1dc1263543ddb2e466 *html/geneWidth.html
576762ba84b5af95440855bbbe65ecf4 *html/genes.html
1c8f9a0e5561aab9cf964a50edb7c0d4 *html/getNeighborhood.html
17f159c891e8fe8bc9794c7f72bad03d *html/getRep.html
967a251ce11a1aa852beb80b241c999d *html/gpcGrouping.html
51c280031794bfe9be0fb6c0280ba203 *html/graphGrouping.html
a89a24fe0606577e27decc7bab0fa9c5 *html/groupInfo.html
3f03d4ee4533f816d64751e45b885c3a *html/groupNames.html
e8dcc239a9821e6c1a05f02cabede1b1 *html/groupStat.html
f36f8d0d6827198edf7fb353dad9a2ce *html/hasGeneGroups.html
c9997238386db87052d0711b1d46ad51 *html/hasGeneInfo.html
a1eab61dbfd589bee9f22e7ad3071c52 *html/hasParalogueLinks.html
72c4794e56ef9f91690a68db62d8301d *html/internalGroupGenes.html
0e3f7501246cbb3c629d1e74bb4816c7 *html/internalMergePangenomes.html
a4380ea6db77aff78bb600bcc38a69e0 *html/internalMetadata.html
293c793b039a16e22caa86f5c05d3b40 *html/kmerLink.html
0ad33452625785265db16b32ea9525e8 *html/kmerSimilarity.html
0e6f1f8234a1cc4c53d82bfc0f5d291b *html/kmerSplit.html
e16c1e6b96a6f9c40ee4af7ec5f396e8 *html/loadPgExample.html
8e39f62930907faa16706b7309c131d3 *html/manualGrouping.html
5d6b178dca04184adb12b124ee1d6170 *html/nGeneGroups.html
bada3c1834fe7e0bedfe6c69f156ace5 *html/nGenes.html
8fb4d9fd935de0464675e17c2dc092ad *html/nOrganisms.html
3889e6b26dc9782e5bb4e2c50de89c07 *html/neighborhoodSplit.html
635fa190749a50f69ac5bbe5867cfe42 *html/orgInfo.html
272a6e483946b5f9216b97182958fd8c *html/orgNames.html
a8fbbb1f64138cf8a375516b2caf7d5b *html/orgStat.html
58aab82c38f6f972f2d258e7267bfd4c *html/pangenome.html
f0dcb21c612d5b299aeb89925070f61a *html/pcGraph.html
9d4d0f1df0d432d4c093656a7d26398e *html/pgFull-class.html
18efad8ae8d7b66eb023e0fe2dcc36c9 *html/pgFullLoc-class.html
220548f8f8da5234849c27d1d7f87ae6 *html/pgInMem-class.html
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5e1dcde6a5b425d1b0e2ced30f9fc95d *html/pgLM-class.html
790d37ccdd896849166676976920bc07 *html/pgLMLoc-class.html
df6d138ebf27004bf0242ad017266197 *html/pgMatrix.html
847dc1c864c43be4c4f60ca6ea0afb3f *html/pgSlim-class.html
2b0c2dfaffce8244c96c01f5ca953f47 *html/pgSlimLoc-class.html
3ffb26be93c3277a8f822df106d7c813 *html/pgVirtual-class.html
85bbf55c9f7e453ed668c751ef945572 *html/pgVirtualLoc-class.html
de8ed03c1c4d640df885dd62818bc9fc *html/plotEvolution.html
d82cb3e2fd4b77ed83619c45b0bf460b *html/plotGroup.html
efecc25aba0b4fc619492bb18ddd1f97 *html/plotNeighborhood.html
b3862244fbd0fcffaf3d5e97d6cde694 *html/plotSimilarity.html
b3ff7d7f389dbcc5c87e28dcfd0e5b00 *html/plotStat.html
e69b1fce888ebf561b28a07f5b676960 *html/plotTree.html
869ac13faa49cd731ed6f3b16d039f66 *html/readAnnot.html
9929c7e5be2ee442c63807deda9c1ceb *html/removeGene.html
0f1d37925c4347c1024a5350eb6ba58f *html/reportGroupChanges.html
f5128a47c893102d873251061c67b255 *html/seqToGeneGroup.html
4ce5d555ab4c4ae7e9b815baf97cdedc *html/seqToOrg.html
e6cfd926ad13ce25b0087e75efe29cbe *html/translated.html
050a6b38f9170c7ad37e74d128acec45 *html/variableRegions.html
dcc4d5274ae1c1339a0476477590a803 *libs/i386/FindMyFriends.dll
e87332e47497a16d9b9899189d47e870 *libs/x64/FindMyFriends.dll
