AllEvents_RNASeq	AllEvents_RNASeq
AllEvents_RNASeq_MP	AllEvents_RNASeq_MP
all_simple_paths2	InternalFunctions
annotate2	InternalFunctions
annotateEvents	InternalFunctions
annotateEventsMultipath	InternalFunctions
AnnotateEvents_KLL	InternalFunctions
AnnotateEvents_RNASeq	InternalFunctions
AnnotateEvents_RNASeq_MultiPath	InternalFunctions
annotateFeatures2	InternalFunctions
ArrayDatamultipath	ArrayDatamultipath
ArraysData	ArraysData
callPrimer3	InternalFunctions
callPrimer3probes	InternalFunctions
CDFfromGTF	CDFfromGTF
CDFfromGTF_Multipath	CDFfromGTF_Multipath
ClassifyEvents	InternalFunctions
convertToSGFeatures2	InternalFunctions
CreateSequenceforProbe	InternalFunctions
estimateAbsoluteConc	InternalFunctions
estimateAbsoluteConcmultipath	InternalFunctions
EventDetection	EventDetection
EventDetectionMultipath	EventDetectionMultipath
EventPointer	EventPointer
EventPointer_IGV	EventPointer_IGV
EventPointer_RNASeq	EventPointer_RNASeq
EventPointer_RNASeq_IGV	EventPointer_RNASeq_IGV
EventPointer_RNASeq_TranRef	EventPointer_RNASeq_TranRef
EventsGTFfromTrancriptomeGTF	EventsGTFfromTrancriptomeGTF
EventXtrans	EventXtrans
filterimagine	InternalFunctions
findPotencialExons	InternalFunctions
FindPrimers	FindPrimers
findTriplets	InternalFunctions
findTriplets2	InternalFunctions
flat2Cdf	InternalFunctions
fullExons	InternalFunctions
genreverse	InternalFunctions
getbootstrapkallisto	getbootstrapkallisto
GetCounts	InternalFunctions
GetCountsMP	InternalFunctions
getDistanceseachPath	InternalFunctions
getDominants2	InternalFunctions
getDominantsFor	InternalFunctions
getDominantsRev	InternalFunctions
getEventMultiPaths	InternalFunctions
getEventPaths	InternalFunctions
getExonsFullSignal	InternalFunctions
getFinalExons	InternalFunctions
getgeneraldata	InternalFunctions
GetIGVPaths	InternalFunctions
getInfo	InternalFunctions
getPSI	InternalFunctions
GetPSI_FromTranRef	GetPSI_FromTranRef
getPSI_RNASeq	InternalFunctions
getPSI_RNASeq_MultiPath	InternalFunctions
getRandomFlow	InternalFunctions
getrankexons	InternalFunctions
getranksequence	InternalFunctions
get_beta	InternalFunctions
get_table	InternalFunctions
get_YB	InternalFunctions
IHsummarization	InternalFunctions
includeaexons	InternalFunctions
InternalFunctions	InternalFunctions
mergeExonsTerminal2	InternalFunctions
MyPrimers	MyPrimers
MyPrimers_taqman	MyPrimers_taqman
pdist2	InternalFunctions
PrepareBam_EP	PrepareBam_EP
PrepareCountData	InternalFunctions
PrepareOutput	InternalFunctions
PrepareProbes	InternalFunctions
PrimerSequenceCommonFor	InternalFunctions
PrimerSequenceCommonRev	InternalFunctions
PrimerSequenceGeneral	InternalFunctions
PrimerSequenceTwo	InternalFunctions
ProbesSequence	InternalFunctions
processFeatures2	InternalFunctions
PSIss	PSIss
PSI_Statistic	PSI_Statistic
sacartranscritos	InternalFunctions
SG_creation	InternalFunctions
SG_creation_RNASeq	InternalFunctions
SG_Info	InternalFunctions
SG_RNASeq	SG_RNASeq
sort.exons	InternalFunctions
transfromedge	InternalFunctions
uniquefast	InternalFunctions
WriteGTF	InternalFunctions
WriteGTF_RNASeq	InternalFunctions
