327c805296e3ffe54b69364c19ec2d62 *CITATION
6f91e36a31868b2ea9dead6de971ae2c *DESCRIPTION
73c51985bc763c3c1946ba13fb101c1b *INDEX
77b74f37e8f7523292349ecf6c6eb8cb *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
2760e73cee440d3ab2a5d7b35a24e8b6 *Meta/hsearch.rds
d47d557fc4e6c0da6508fa18da0fecd9 *Meta/links.rds
253442bd723f8d0e3268b838d81b209a *Meta/nsInfo.rds
9eeb014dc6479faa2010c43e580fb883 *Meta/package.rds
edee6b987da2c24ca88948ac8e8c6b77 *Meta/vignette.rds
315b03113ca2d90170f8b53a1dcc39e7 *NAMESPACE
88be40ae79af7ac03a1d890b91a29034 *NEWS.md
ebf0fc819595d631b8bf280c4b049940 *R/ELMER
4752d00bfe7b777d38e80169faba6781 *R/ELMER.rdb
026066908bb73f02c2c7fd4e2a5b806e *R/ELMER.rdx
355b58e4c466d961348a8e3448449b21 *doc/analysis_data_input.R
ea751e048160a5578ba124c4bd32b399 *doc/analysis_data_input.Rmd
4e891bebe647fb7782c939babd58f56a *doc/analysis_data_input.html
3fc3c7b47dc115f17af1b87671273513 *doc/analysis_diff_meth.R
4a78964f047164cd3627328172cecd08 *doc/analysis_diff_meth.Rmd
ab6cc4705efac1360715fd831d31c2b3 *doc/analysis_diff_meth.html
1629e0040d232763e61491bef118c173 *doc/analysis_get_pair.R
92ffab806c2d8c1882bd7fd8c377c62a *doc/analysis_get_pair.Rmd
1684f712d5e0702ea48b1e6154d0c98a *doc/analysis_get_pair.html
c2a45680041b159e29ca028381d3f7df *doc/analysis_gui.R
cf3c79ef10d6f383a20886a4bf6e0f7e *doc/analysis_gui.Rmd
59defe8310513e70ae0fbb188fefd948 *doc/analysis_gui.html
311cf2d21ef3278fc43890eb598bd2ef *doc/analysis_motif_enrichment.R
2323d2f679b9cc6856a447348bd1e2bb *doc/analysis_motif_enrichment.Rmd
87d36b613fd9b6246d4635fae3b0684e *doc/analysis_motif_enrichment.html
b334f059578a4f7a36a745b599bd6665 *doc/analysis_regulatory_tf.R
6581441af57e411b934847bb67902629 *doc/analysis_regulatory_tf.Rmd
ce6b4a3b4b081cffcaf07e59943d5916 *doc/analysis_regulatory_tf.html
b6eadf8626a1a9daeced567119d8f008 *doc/index.R
97eaf4964c4a22822e9ca255fd4034bd *doc/index.Rmd
eda5ae7cca9074c741592a9ffb01bd01 *doc/index.html
b59dd13bd521def891b434b5db39ea15 *doc/input.R
56073300d69f50d7e6e052364e3b9061 *doc/input.Rmd
b5883f88b28456b74c083c9a8c77a41f *doc/input.html
9ce31d66bef3743c08c1552216034391 *doc/pipe.R
1e5441b97b6428095fd2a109377c4589 *doc/pipe.Rmd
c2e08408d7e2af86f8f9db7b1121d4be *doc/pipe.html
7ca4243ebfe9161ca687c9c80296f3c0 *doc/plots_TF.R
1764ea51703868c34167a4e2aa6a85db *doc/plots_TF.Rmd
9aeb651777ce8dc3943611f41bf69927 *doc/plots_TF.html
c4d9f10d50393187d25089fd4b1d6345 *doc/plots_heatmap.R
411cf58b062cc9df3ab4b91576ce81a8 *doc/plots_heatmap.Rmd
fbfbf631d5dfaa5fbfd169e12d3fa1d3 *doc/plots_heatmap.html
90a8192f5fb0090a5df843566d07eb7b *doc/plots_motif_enrichment.R
2e4321c8f8f5be00efe87eb315064d7a *doc/plots_motif_enrichment.Rmd
a120ae4574c3498cc9553a94f46cd01c *doc/plots_motif_enrichment.html
17c0911bdc506896ff4ef5f6b8138360 *doc/plots_scatter.R
c375b862b1f401a06f2816363660f6a9 *doc/plots_scatter.Rmd
21cddfa965b61776d32bebe9e602ec7f *doc/plots_scatter.html
be581698aa6350f8efab1882a6d13e33 *doc/plots_schematic.R
13293bcf069ee05d83811b36922fc575 *doc/plots_schematic.Rmd
dbdb212068f341994b6056c440192017 *doc/plots_schematic.html
24aad4c684e61664003adfcdc1f79b7a *doc/usecase.R
1fc48bb71936f6206b3eed7c7e9ddc16 *doc/usecase.Rmd
7b75d85de83cf5e5a7b707c00bec83d2 *doc/usecase.html
3ad9bf469b554e107f6cf46a44f70ab6 *help/AnIndex
dc7218078137cd78f268fd8f5c0a5692 *help/ELMER.rdb
fd5bfc387494a44b2799aeaa907b85bc *help/ELMER.rdx
57037cd95b3494273572d57769b34e7b *help/aliases.rds
0b4f1cab44932228366ccdc3357284e7 *help/paths.rds
327f3215d27198a9d0841839a0cd8658 *html/00Index.html
619142c4774f8f2c2bb193051d9ecbdb *html/ELMER.html
c2146a587bc4dc9d33e9805e536d729e *html/Get.Pvalue.p.html
c0363695ee820a35afc600e8a5979c6c *html/GetNearGenes.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5eb98eceb404e48f2bf6f53d2d731ef2 *html/Stat.diff.meth.html
1421c0793fcd12e86c02445132349fc5 *html/Stat.nonpara.html
6f946b86e9a249fbfbe7d348d04b535e *html/Stat.nonpara.permu.html
01b5af3d4d36a6e454952f15e4012b53 *html/TCGA.pipe.html
2843cd3ef4c1b7df0f0a7f7762d71073 *html/TF.rank.plot.html
ea93fb96b1ca3ccbc323f14bbf26cf30 *html/TFsurvival.plot.html
d543e611d161bbb67d566a721a9aca3b *html/addDistNearestTSS.html
1855be0dffae93d416c4ca9f8aa58d8e *html/addMutCol.html
f4096025c661a633a6b920870aa140bf *html/calcDistNearestTSS.html
1b47b85bd942ca4d148072d374fdf80d *html/calculateEnrichement.html
03c40cb1f408e0ad553fbe7893a77a13 *html/createBigWigDNAmetArray.html
2217b9184ac4f9158231326f3291f9a4 *html/createIGVtrack.html
665c69feffc5f7b31caeb181abd771ac *html/createMAE.html
24bf2d7ae1057e988d69e3731b29b783 *html/createMotifRelevantTfs.html
e74a31e08260484d5ca7c2c507c8d855 *html/createSummaryDocument.html
ade91c5b7e829e60945903ada74e98ec *html/createTSVTemplates.html
b3179d3a1b41b80dc236a06035b5ccd9 *html/findMotifRegion.html
426460676c23032349b929558f7b25be *html/get.TFs.html
f40c7a06b452e03225c67a08556a01a5 *html/get.diff.meth.html
85c30bbc5322c1b8e4ebfd4829b9126d *html/get.enriched.motif.html
ecd49b541e021e64976403d2d4f61bb3 *html/get.feature.probe.html
67eb8e08041efa59525e6057933396d3 *html/get.pair.html
35df1a511bde229ce64737ff2db5b794 *html/get.permu.html
183abcf37dba688cd6c97d94c8c2728b *html/get.tab.html
0889e1ed53f5c7730339f5101f1d562d *html/get.tabs.html
40aeb9fead6966f9c560f9e40ade7a88 *html/get450K.html
ff2f9b050bd9b80a9f1d1f3e04f28c80 *html/getClinic.html
ae86703d3aba9410981287bba6bb2c51 *html/getExp.html
548eb287137f969320785458dc233493 *html/getExpSamples.html
e551974889246b1736ad7894dc8075a2 *html/getGeneID.html
e07040dbd0c8bde2e153698d150eccdc *html/getMet.html
ad43172b47d052278e9e8ee59a1faeb4 *html/getMetSamples.html
80048fd83a638b33877ede7dcccfc5d7 *html/getRNAseq.html
8e2fc9f144aff87aba1988693cecf0fc *html/getRandomPairs.html
c6092e885212dd9261f16ca9406015ca *html/getRegionNearGenes.html
f56520d2ebf48fa5eb82474fa5c90662 *html/getSymbol.html
48e08169e16f9dfc8c31352f0b939570 *html/getTCGA.html
0d57bbda15c60c8f323290f7dd168bca *html/getTF.html
601e1ed9618ab70193a6fda160492a66 *html/getTFBindingSites.html
30f8b7a14879590a0f546fc835f13698 *html/getTFtargets.html
14d6429b46b3a2c4333341b53efd0a9e *html/getTSS.html
1c9712d667a51a6d8e8b92820f42b083 *html/heatmapGene.html
ca182f5b6a5912cb767703fa7661702c *html/heatmapPairs.html
dcd526b0c2904ee59f214e618a60b02c *html/lm_eqn.html
c97880d16e3890a52670ff5fbfe76ae5 *html/metBoxPlot.html
d780f1479b93efa7fbdc92e87b43a64b *html/motif.enrichment.plot.html
bc5ba0df19a56c5c9fa45754fa8c1067 *html/preAssociationProbeFiltering.html
e5e11cbb78f5e517c117cb87d4fa9246 *html/promoterMeth.html
6117240dc3d92c1e876dc650c11e9c94 *html/render_report.html
cf87393c6c33c678c88332958a978bed *html/scatter.html
0d1a095c9e0c3945665d56f6881af994 *html/scatter.plot.html
99ec25859bde8abb4ff697a07cb7493b *html/schematic.plot.html
cedd69c48742b4d5dc3f3db358bee98f *html/summarizeTF.html
41565610b7959e3f25f05651b578779a *rmd/style.css
0f294c17ab1f6935e15fbee45fed2768 *rmd/tabset-dropdown.html
a34915f2544073e514c7b6ce7cad3de2 *rmd/template.Rmd
