c35a2c4669898aa311e7803e43eea101 *DESCRIPTION
428d234ca810c6b2bb1867c5b3df63a2 *INDEX
9b114ce4c9960733fdb2e92650da7f24 *Meta/Rd.rds
98d62ec4c6469242cee4134c3837d655 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
9923cce6ab0999352cd23ce62f63e53f *Meta/hsearch.rds
d1c9f0f54ac956f7780fd8f8ea50eabf *Meta/links.rds
a9b19bcd7b78cde2443e7963237208cf *Meta/nsInfo.rds
dbe8d4e287f450d9dc5ab6973d0add17 *Meta/package.rds
2817db2f5b06f534e5fea7e8307be977 *Meta/vignette.rds
df1dfca350441cf1c86346fcffe5a90f *NAMESPACE
136c8d589b0264abdb8feedeeedcd616 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DIAlignR
db9a1a5ce6c3eaa5f60528b70d01bbce *R/DIAlignR.rdb
addbc47010d8d20efca39115f051f19c *R/DIAlignR.rdx
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4bb7490619144f4e66a9db571f6fbba5 *data/XIC_QFNNTDIVLLEDFQK_3_DIAlignR.rda
e75c388725085ed10b50d1d82e354788 *data/multipeptide_DIAlignR.rda
0f59ca3fef808d83525241999e5c1c95 *data/oswFiles_DIAlignR.rda
9f3649b7d3028d21122f745888f590db *doc/DIAlignR-vignette.R
36214cf594b13498017049cd406bac5e *doc/DIAlignR-vignette.Rmd
2375f42858e3cd7095a21c31b3735eff *doc/DIAlignR-vignette.html
9bb08db5030d3941a3e0a31699ab67d6 *doc/index.html
963c99919972ecef8e0ea3d6c6a6c939 *extdata/mzml/hroest_K120808_Strep10%PlasmaBiolRepl1_R03_SW_filt.chrom.mzML
20e48a08eff06f973e719d294211c5f6 *extdata/mzml/hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt.chrom.mzML
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3bfbee161a863033aa8c13183ecf66d5 *help/AnIndex
a321525edd7c638e16f7caafee3c6a38 *help/DIAlignR.rdb
7c2f57b0896f42b377ed812160d683f3 *help/DIAlignR.rdx
2b3852e7abb477cd10c3c63fdabb9c57 *help/aliases.rds
884b2acd436af68360c905b8a4eb626a *help/paths.rds
63374ac3313536fd3aab3b14b9f5b20f *html/00Index.html
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9f81d1ed52a37a1eca9214a4f54c8a3b *html/AffineAlignObjLight-class.html
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733e510b5adef93ab4acd0fc895ee67e *html/AlignObj-class.html
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28793e4015e3ec8cb9d46e0f1b9a2f3a *html/alignChromatogramsCpp.html
962c56fff005783efe69d3252c030b82 *html/alignTargetedRuns.html
aa4419e9fba96319013b5076860e803c *html/analytesFromFeatures.html
e269e10f80566331d61d9cd8afdf8127 *html/areaIntegrator.html
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0e7adfab7eb05d55439806c45f738032 *html/as.list-AffineAlignObjMedium-method.html
5fd8f4e31a732c89d6b19145e1814cba *html/as.list-AlignObj-method.html
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cc76f8b89b6149971292337f80884084 *html/constrainSimCpp.html
91f8b8169572d769c5846ddbe85ba87c *html/doAffineAlignmentCpp.html
c29881d4e93d6566cc272cdedbd7d7d0 *html/doAlignmentCpp.html
7e9d13e01feefeca0d55c81075b0e487 *html/extractXIC_group.html
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8782a3967bcf887b8bc9519331098193 *html/fetchFeaturesFromRun.html
5b9d5c671aff09cbf3511df23600019b *html/fetchPrecursorsInfo.html
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5911e2bf9d2b5e6d87c548d9f1c24f49 *html/getAlignObjs.html
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99b0ab61a5757f36e1e17c40aa0985be *html/getBaseGapPenaltyCpp.html
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cfefe1c73c145e5fa1b8b6cc750ebed7 *html/getFeaturesQuery.html
d88e8820394587671aceac879c392867 *html/getGlobalAlignMaskCpp.html
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a9535989a3123db41ebc7a5f269b2774 *html/getGlobalFits.html
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fe8052c888cb6d64cc3b2f2f13a713bc *html/getMultipeptide.html
c228793db8193ce48fc29104adf7a3be *html/getOswAnalytes.html
d0d70d54e8416a835373b0db90ba2081 *html/getOswFiles.html
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4c1372e7e14b39e4be638c699e4970ba *html/getPrecursors.html
2e08723f68f9e09bf0ab9fe12e7db990 *html/getPrecursorsQuery.html
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d72c9351a43940d9bfb17e3346ebb64a *html/getQuery.html
f43ad6a8eb015e47b95ff15f5bbe1186 *html/getRSE.html
2b5542d788f5469b15ea26e904a8a14c *html/getRefRun.html
bbcdc661a5cc78d783673115784887cf *html/getRunNames.html
49c28687eb7cb866207bdb1e2fef9124 *html/getSeqSimMatCpp.html
b68d9949015cfc8bb2cee8e02e420d3e *html/getXICs.html
bb24a7dba7d6d2530c3a22b6a5bfe0b2 *html/getXICs4AlignObj.html
40adc5224f2b7a0b0b7b64454dbceea9 *html/mapIdxToTime.html
d0318a22d42e2175d137d879a81979df *html/mapPrecursorToChromIndices.html
7807a937a782ff356056481d8e3d57a9 *html/mappedRTfromAlignObj.html
a2a23974cfd33d25984840bd8cc22b39 *html/mergeOswAnalytes_ChromHeader.html
fbac137840af01de7a6a797849957ee1 *html/multipeptide_DIAlignR.html
8a74b1a6a1631c4fbb5efa3754f1ae82 *html/oswFiles_DIAlignR.html
2e30836e14f820ddba219afb84754ebf *html/pickNearestFeature.html
cc508bbe029e6cd133112d3d451a1633 *html/plotAlignedAnalytes.html
f268de4f82f38508e4da5a0c27927d5d *html/plotAlignmentPath.html
c9c506f6bac072073252ff53828ff448 *html/plotAnalyteXICs.html
f222a1688e63189b132624394226ec01 *html/plotSingleAlignedChrom.html
d8f454ecee534663e6c3a346c8b172e9 *html/plotXICgroup.html
453b97f99955b717aecee61659be6568 *html/readChromatogramHeader.html
582a5c4d7bf92e97ec050baa8a3975d7 *html/setAlignmentRank.html
cbb315c86e6443cc6b793ffcd9f04cee *html/smoothSingleXIC.html
4eb84f078d0d74454c999b6a514372c4 *html/smoothXICs.html
80c9eeefafd38f210b963ad656aa7a9b *html/trimXICs.html
fa57a4b7bb5f804435d9d49b7c7002d8 *html/updateFileInfo.html
c5d844b991c8119223c6b4624d820aec *html/writeTables.html
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