1cc00c4cda5e6d81e7b60de12ba7f841 *CITATION
0cccacc1fa5ad0c9086ee8a1bc283389 *DESCRIPTION
40b332d4eb1688a0f94e73d97b7ec78a *INDEX
90a5a361e2ee669454212a33abfb94be *LICENCE
259921ca554e54b9f926885737581ea0 *Meta/Rd.rds
6ccb4308b6f3357a8db0b403a2cd3cff *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
e86fdef42ad3ac08e300a9a0edd8979a *Meta/hsearch.rds
ea3a38ab791a6fc2c3d59fdf2fa8b581 *Meta/links.rds
9a680c1a6a9214d088934a46357cda14 *Meta/nsInfo.rds
035a06292d8ee99256e5023ce50d1b80 *Meta/package.rds
d7581dad05fb7630f2ec0bf5eba05487 *Meta/vignette.rds
93404f1e03f601fc2c32d242d9e800d1 *NAMESPACE
c12d36dd28e1e039b5e59c0913566882 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DChIPRep
2e9251e542e4d9309ada5fe551cd09d7 *R/DChIPRep.rdb
203994c6f36bab297ffb0b3bdb052a12 *R/DChIPRep.rdx
586f4325fd5f9d00bdc71b4d7f6fa1f3 *REFERENCES.bib
0e01458476539c0c37b13930ad80c540 *data/Rdata.rdb
ddd38f71e2a2aec2572908709d77b721 *data/Rdata.rds
58f2341aa5f2b24f97e058c939f40215 *data/Rdata.rdx
4adbc252e9da501efa24eb046611c147 *doc/DChIPRepVignette.R
24a72c306e605cbd39036bfae1fd10d8 *doc/DChIPRepVignette.Rmd
1d2970047cdbbf11264422f1f54ef2ec *doc/DChIPRepVignette.html
2c62f2a90a4071b2cba63fcc82ed9876 *doc/index.html
fc6b649812959489432dea8b79ad7e22 *exec/DChIPRep.py
e4cbd1b84aec42dc495e9d358efe38f9 *extdata/BY_conf_K4me3_1__ORF_count.txt
a244a49d9e54aa8b33ea9c27b449efd1 *extdata/BY_conf_K4me3_2__ORF_count.txt
134e18cf2217983319a9c803ae32b5f5 *extdata/BY_conf_K4me3_3__ORF_count.txt
636d9760c80f3c27e35cd6ff2c502258 *extdata/BY_conf_WCE_1__ORF_count.txt
f80e4077caea40ea668467cc7e59b265 *extdata/BY_conf_WCE_2__ORF_count.txt
f96ab7e83afba76b18115f904419dd09 *extdata/BY_conf_WCE_3__ORF_count.txt
e0dc223dd119ca6e67266500c7999ffb *extdata/SET2_conf_K4me3_1__ORF_count.txt
ec40d79f0c6939b792189c9dfaf624af *extdata/SET2_conf_K4me3_2__ORF_count.txt
f6e1b7e21960f9fd9a6320b005722313 *extdata/SET2_conf_K4me3_3__ORF_count.txt
8a337a7280a1db1f92bad381b2044335 *extdata/SET2_conf_WCE_1__ORF_count.txt
9e6d5210fbb010db3774d1801a610d09 *extdata/SET2_conf_WCE_2__ORF_count.txt
cc1bb67c22e74d69d2a39a24b0df884a *extdata/SET2_conf_WCE_3__ORF_count.txt
652dfe5e622f513c20f360878f7a28a7 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam
f0467a9f4563a5157f6e0443ab746d26 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam.bai
b7823fd346f023e863fd023e6b87611f *help/AnIndex
4c0b850b3abf8c64a0808264586e327e *help/DChIPRep.rdb
4a5c4f78e344fb035af09899cf784d82 *help/DChIPRep.rdx
1b6964793638fd5233bdb9ed31f419c1 *help/aliases.rds
30707ca80a88caa9ae5645444524961e *help/paths.rds
6e36a881a3a10081efacb282680e1642 *html/00Index.html
abfa996010ff5c656c4813ab69799d2f *html/DChIPRep.html
67f44635bfa8b332a30bcb53bddca3e3 *html/DChIPRepResults.html
f6cb86d44966e295d063012746d81cad *html/DESeq2Data.html
96e1c24fafbab9d4ca4f460e44667098 *html/FDRresults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
1e33eccb6fee5b62740d688905d6f414 *html/TSS_galonska.html
b7a50944a649f9ffedf2dc37dd442415 *html/chip_galonska.html
e4782194db8d58548c7b94f3441e921f *html/exampleChipData.html
a76fa69acdb6812b2761adf239e3ed4c *html/exampleInputData.html
33d3f1d55125629c0a423f0e3e03b06d *html/exampleSampleTable.html
28324df76cd67684a15b0eba6aea867d *html/getMATfromDataFrame.html
ac65f0e18779e8115285d986e197de04 *html/importData.html
9fcfab74d5237a68f152af3fba2af1e6 *html/importDataFromMatrices.html
c5beaaa331382fdc9da4aef68b5eddf6 *html/importData_soGGi.html
d992b7d3345deeee13be343c8c86da8e *html/input_galonska.html
d177ba184a9a77dfd7c1de7114974050 *html/plotProfiles.html
3dbc99ce55e0be7d532c68d29db6a56b *html/plotSignificance.html
970d330c7f8c88674e5fd7b2032412b9 *html/resultsDChIPRep.html
19b301f1bb0d13c2e969d6b260730f3f *html/robust_mean.html
262d9576291a75923e6b25fc44c63984 *html/runTesting.html
b659fa4bdb8ddd2089c1e83359c0ce2f *html/sample_table_galonska.html
130f659db45cfd56db70d8a2434c3061 *html/show.html
c413cf9d3c506b02d2ba593bc7df3f73 *html/summarizeCountsPerPosition.html
01fd376f834090567688d503f68cde91 *html/testData.html
