BRGenomics-package	BRGenomics-package
aggregateByNdimBins	binNDimensions
applyNFsGRanges	applyNFsGRanges
binNdimensions	binNDimensions
bootstrap-signal-by-position	bootstrap-signal-by-position
BRGenomics	BRGenomics-package
densityInNdimBins	binNDimensions
genebodies	genebodies
getCountsByPositions	getCountsByPositions
getCountsByRegions	getCountsByRegions
getDESeqDataSet	getDESeqDataSet
getDESeqResults	getDESeqResults
getMaxPositionsBySignal	getMaxPositionsBySignal
getPausingIndices	getPausingIndices
getSpikeInCounts	getSpikeInCounts
getSpikeInNFs	getSpikeInNFs
getSpikeInReads	getSpikeInCounts
getStrandedCoverage	getStrandedCoverage
import-functions	import-functions
import_bam	import_bam
import_bam_ATACseq	import_bam
import_bam_PROcap	import_bam
import_bam_PROseq	import_bam
import_bedGraph	import-functions
import_bigWig	import-functions
intersectByGene	intersectByGene
isBRG	makeGRangesBRG
makeGRangesBRG	makeGRangesBRG
mergeGRangesData	mergeGRangesData
mergeReplicates	mergeReplicates
metaSubsample	bootstrap-signal-by-position
metaSubsampleMatrix	bootstrap-signal-by-position
PROseq	PROseq-data
PROseq-data	PROseq-data
PROseq_paired	PROseq-data
reduceByGene	intersectByGene
removeSpikeInReads	getSpikeInCounts
spikeInNormGRanges	getSpikeInNFs
subsampleBySpikeIn	subsampleBySpikeIn
subsampleGRanges	subsampleGRanges
subsetRegionsBySignal	subsetRegionsBySignal
tidyChromosomes	tidyChromosomes
txs_dm6_chr4	txs_dm6_chr4
