acceptor.m	acceptor.m
addEnsemblAnnotation	addEnsemblAnnotation
annotateEvents	annotateEvents
callPrimer3	callPrimer3
checkPrimer	checkPrimer
compatible_cds	compatible_cds
compatible_tx	compatible_tx
donor.m	donor.m
eventOutcomeCompare	eventOutcomeCompare
eventOutcomeTranslate	eventOutcomeTranslate
eventPlot	eventPlot
extendROI	extendROI
extractSpliceEvents	extractSpliceEvents
extractSpliceSites	extractSpliceSites
findCompatibleEvents	findCompatibleEvents
findCompatibleExon	findCompatibleExon
findExactOverlaps	findExactOverlaps
findTermination	findTermination
findTX	findTX
getPCRsizes	getPCRsizes
getRegionDNA	getRegionDNA
insertRegion	insertRegion
makeROI	makeROI
makeUniqueIDs	makeUniqueIDs
matchExons	matchExons
metaremove	metaremove
pcr_result1	pcr_result1
plot_seqlogo	plot_seqlogo
primers	primers
psiPlot	psiPlot
region_minus_exon	region_minus_exon
removeRegion	removeRegion
remvalue	remvalue
roi	roi
shapiroAcceptor	shapiroAcceptor
shapiroDensity	shapiroDensity
shapiroDonor	shapiroDonor
splice_data	splice_data
splice_fasta	splice_fasta
splitPCRhit	splitPCRhit
thecds	thecds
theexons	theexons
valid_cds	valid_cds
valid_tx	valid_tx
