Package: CytoML
Type: Package
Title: A GatingML Interface for Cross Platform Cytometry Data Sharing
Version: 2.0.5
Date: 2016-04-15
Author: Mike Jiang, J. Spidlen., N. Gopalakrishnan, F. Hahne, B. Ellis, R. Gentleman, M. Dalphin, N. Le Meur, B. Purcell
Maintainer: Mike Jiang <wjiang2@fhcrc.org>, Jake Wagner <jpwagner@fhcrc.org>
Description: Uses platform-specific implemenations of the GatingML2.0 standard 
    to exchange gated cytometry data with other software platforms.
License: file LICENSE
License_restricts_use: yes
LazyData: TRUE
Imports: cytolib(>= 2.0.3), flowCore (>= 1.99.10), flowWorkspace (>=
        3.99.15), openCyto (>= 1.99.2), XML, data.table, jsonlite,
        RBGL, Rgraphviz, Biobase, methods, graph, graphics, utils,
        base64enc, plyr, dplyr, grDevices, methods, ggcyto (>= 1.11.4),
        yaml, lattice, stats, corpcor, RUnit, tibble, RcppParallel,
        xml2
biocViews: ImmunoOncology, FlowCytometry, DataImport,
        DataRepresentation
LinkingTo: Rcpp, BH(>= 1.62.0-1), RProtoBufLib, cytolib ( >=
        2.0.3),Rhdf5lib, RcppArmadillo, RcppParallel(>= 4.4.2-1),
        flowWorkspace
Suggests: testthat, flowWorkspaceData , knitr, parallel
VignetteBuilder: knitr
RoxygenNote: 7.1.0
BugReports: https://github.com/RGLab/CytoML/issues
URL: https://github.com/RGLab/CytoML
Collate: 'AllClasses.R' 'GatingSet2cytobank.R' 'GatingSet2flowJo.R'
        'RcppExports.R' 'gate-methods.R' 'compensation.R'
        'cytobank2GatingSet.R' 'cytobankExperiment.R'
        'cytolibml_bin_path.R' 'flowJoWorkspace_Methods.R'
        'diva2GatingSet.R' 'flowUtils_functions.R' 'gatingML.R'
        'read.gatingML.cytobank.R' 'graphGML_methods.R'
        'helperFunctions.R' 'parameter-methods.R' 'transforms.R'
        'utils.R' 'writeGatingML.R' 'zzz.R'
SystemRequirements: xml2, GNU make, C++11
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/CytoML
git_branch: RELEASE_3_11
git_last_commit: b52baea
git_last_commit_date: 2020-06-15
Date/Publication: 2020-06-15
NeedsCompilation: yes
Packaged: 2020-06-16 02:12:55 UTC; biocbuild
Depends: R (>= 3.5.0)
Built: R 4.0.0; x86_64-apple-darwin17.0; 2020-06-16 13:35:13 UTC; unix
