Package: wiggleplotr
Title: Make read coverage plots from BigWig files
Version: 1.10.1
Author: Kaur Alasoo [aut, cre]
Maintainer: Kaur Alasoo <kaur.alasoo@gmail.com>
Description: Tools to visualise read coverage from sequencing
        experiments together with genomic annotations (genes,
        transcripts, peaks). Introns of long transcripts can be
        rescaled to a fixed length for better visualisation of exonic
        read coverage.
Depends: R (>= 3.6)
Imports: dplyr, ggplot2 (>= 2.2.0), GenomicRanges, rtracklayer,
        cowplot, assertthat, purrr, S4Vectors, IRanges, GenomeInfoDb
License: Apache License 2.0
LazyData: true
RoxygenNote: 6.1.1
Suggests: knitr, rmarkdown, biomaRt, GenomicFeatures, testthat,
        ensembldb, EnsDb.Hsapiens.v86, org.Hs.eg.db,
        TxDb.Hsapiens.UCSC.hg38.knownGene, AnnotationDbi,
        AnnotationFilter
VignetteBuilder: knitr
biocViews: ImmunoOncology, Coverage, RNASeq, ChIPSeq, Sequencing,
        Visualization, GeneExpression, Transcription,
        AlternativeSplicing
git_url: https://git.bioconductor.org/packages/wiggleplotr
git_branch: RELEASE_3_10
git_last_commit: ec89346
git_last_commit_date: 2019-11-01
Date/Publication: 2019-11-01
NeedsCompilation: no
Packaged: 2019-11-02 03:37:57 UTC; biocbuild
Built: R 3.6.1; ; 2019-11-02 14:08:34 UTC; windows
