beadc {wateRmelon} | R Documentation

## Calculates the number of samples with bead count <3 for each probe in matrix of bead count values

### Description

Calculates the number of samples with bead count <3 for each probe in matrix of bead count values.

### Usage

    beadc(x)

### Arguments

`x` | matrix of bead count values returned by the beadcount function

### Value

Vector of number of samples with bead count <3 for each probe

### Note

The beadc function is internal to the pfilter function

### Author(s)

ruth.pidsley@kcl.ac.uk

### References

[1] Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)

[Package wateRmelon version 1.30.0 Index]