328105555ec1dbd1e185a03ed0f8b73f *DESCRIPTION
186d1f42bd997bac4e8450f9e13e26c8 *INDEX
9c7118a89934823d6d9726278f94e07c *Meta/Rd.rds
687b510ca68e02601bb917c0424ade6f *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
59eab1b7e09e5e19ef756b02604f3e15 *Meta/hsearch.rds
700f9ecde135a68c45a5e037122456f0 *Meta/links.rds
67209c3a7729d87d94539ee15b5ac265 *Meta/nsInfo.rds
0db8a3b1d6ed7fa274bb89709641fe79 *Meta/package.rds
197244b68203f41441beed7ef72f0c1f *Meta/vignette.rds
6e08034f74f8210c129eeecbc14b72cf *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/transcriptR
7bf27fefeb39e2094ffb0540a0fa41cb *R/transcriptR.rdb
420f4e2d4ddf2cca00575926c6863d4f *R/transcriptR.rdx
cdccf718c0f06aa2b18213b6d1899638 *data/annot.rda
3292676f3b034c821e78e5ba5ed955f1 *data/cds.rda
1b1ba5e803d213909fdfda9ee7ef6fd4 *data/datalist
bde948fa74c19e5c334b355904c7b1f9 *data/tds.rda
29123ca7b1c27c22c15d4f8873a87a6d *doc/index.html
e64758f00d5f437f0917a224b6dcf653 *doc/transcriptR.R
81c92839043b901e0d64be31e975e329 *doc/transcriptR.Rmd
45155289866d5ff8f2013d06f043f3d1 *doc/transcriptR.pdf
d50801198a9fc94ca2d340ba90cf9e15 *extdata/chip_reads.bam
b1bd75dd1f9641b9e89f1381a486d259 *extdata/chip_reads.bam.bai
7f2999eb7940a0c31d83d3a39444a75b *extdata/peaks.txt
b3efed05f16945956ab43ba1657823da *extdata/rna_reads.bam
1b5a7ab4d4b50c588dc2b61806e1537f *extdata/rna_reads.bam.bai
f47c69f99c9535dde5180b75f6485c58 *help/AnIndex
edf6f72a16059bd3f01d0c2c524cca50 *help/aliases.rds
8a782f7060764801040f9b85e214ea3d *help/paths.rds
f395a02ce2fd1a8e78ec28c6f72d40f1 *help/transcriptR.rdb
c6e4b4d0786372d4213769fd6f0899d6 *help/transcriptR.rdx
15bdac66220d207f3eadb36a1d1afb3a *html/00Index.html
c3c9712d3b7458ee7b6b09115c16249e *html/ChipDataSet-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a35165a1ac8b72b402cc03e3fc08d4a3 *html/TranscriptionDataSet-class.html
1a7348016729107358764ea047b9caf0 *html/addFeature-methods.html
c81fdea87ce9577bcc3320839329b9da *html/annot.html
cbf69ffd9c2cbe48fc7ff6084c6c36d3 *html/annotateTranscripts-methods.html
07ebf48653798a9a0fd0cc67dd12dfda *html/breakTranscriptsByPeaks-methods.html
214d0f2f04b2fd3e0d4342366462f596 *html/cds.html
d58fe9ba29cbd4241b11fd26caa36043 *html/constructCDS.html
41e0d0783d1344ad7f8aacdb4aaef00e *html/constructTDS.html
04a97baacc60eb48decb4e7d2483edaa *html/detectTranscripts-methods.html
b9a2ecf8741db411506912a7001732ea *html/estimateBackground-methods.html
9242a3dfb92cf60e0adf6f9b73203920 *html/estimateGapDistance-methods.html
7224f9f2d6b88cfb4cb29281c482317d *html/exportCoverage-methods.html
fad60136f19c32fc18e54a8dc728a41b *html/getConfusionMatrix-methods.html
2b1b1c49491a9174c50599c31945d5da *html/getGenomicAnnot-methods.html
df00b132dbc29a2a9ff0ad16ef8a6e29 *html/getPeaks-methods.html
93fc2459a9b604a700efdf4573d5f47e *html/getPredictorSignificance-methods.html
44ecfed9cf6adae03ec665e6b9f1b4f0 *html/getProbTreshold-methods.html
2a49595a60ea07b17fe0de92b468d7d6 *html/getQuadProb-methods.html
6cb1b4acfb2913efe831db107ab44472 *html/getTestedGapDistances-methods.html
0849a98b7039f9d6f73de1983acb483e *html/getTranscripts-methods.html
e80a15d4208a789a2e09472caac1012d *html/peaksToBed-methods.html
959aca6050538284b3ca888727dce686 *html/plotErrorRate-methods.html
50a7cbd8cb62703373b62d03a776bd5a *html/plotFeatures-methods.html
039ae73e894ce62f91646b2811eb9c69 *html/plotGenomicAnnot-methods.html
97eb2e3830eee442e56db476fd0f0af5 *html/plotROC-methods.html
8a3fcbcacccd3fb9033b991bfffb708c *html/predictStrand-methods.html
c0d8e23365844bede53e20aa65b2ea16 *html/predictTssOverlap-methods.html
a9188c5b1327d1bc10ec581942c39338 *html/show.html
e0310a82a2e97fd589e2635d4331f9a5 *html/tds.html
3936dcfeac5a5447e890da53f69d5e1a *html/transcriptsToBed-methods.html
