273a6d643c07ac3db9a39642df0c361a *DESCRIPTION
1a5ab17ffc6dc99ccecbd891cb755ced *INDEX
c5c8d73f723ddeed2fc2b7b7b14e1c36 *Meta/Rd.rds
72c6cc196235c880f21a9c25543f01e3 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
a29544655dd8c9c1789a68be6958ceb0 *Meta/hsearch.rds
9960a2abdfdfcbfbeb79a9c0e3e4526d *Meta/links.rds
efcc92e1105d5451d47705a71218a74b *Meta/nsInfo.rds
76399f1e0fb95b30f8f854d4f6bb0fd7 *Meta/package.rds
6a6d8e32daaa7e2dd91e06959191a77d *Meta/vignette.rds
015456ecd3f1e8c9c8ee712e9d370949 *NAMESPACE
ac186152ba1cb2017106ebbb9daed362 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/scPipe
8aff0d0f6af14d37b741fc6b4040db0e *R/scPipe.rdb
f86c70d209966d1d447debcfb90ed61a *R/scPipe.rdx
1dc17379efee0dc44aee270095903ff5 *data/sc_sample_data.RData
2594a9728f0d35790ec31657b0f9c880 *data/sc_sample_qc.RData
d2ef606b4d80afde2dcc99daa120f8cd *doc/index.html
eb95dc99d30e0f2d1093f4d226aeb9f5 *doc/scPipe_tutorial.R
233da7a79cd0dae83554eb1042d48561 *doc/scPipe_tutorial.Rmd
81f726e5c4e3d8c476cbf72309d9abae *doc/scPipe_tutorial.html
339e0225f3294bf2bf89ac33d71a73c2 *extdata/ERCC92.fa
6e4cb84dc35b55f6c26e244c3d518583 *extdata/ERCC92_anno.gff3
e6007becb38885068ee4c1569f11676c *extdata/barcode_anno.csv
8577e8f76719bf43c33a7f7db593ef83 *extdata/ens_tiny_anno.gff3.gz
95dcee5780eae0513826393d7731faf6 *extdata/ens_tiny_anno.gtf.gz
4b69e9071aaebe7e0f0b72faba999836 *extdata/ensembl_hg38_chrY.gtf.gz
2775eff980dad9481fe7170ef11b3b29 *extdata/ensembl_y_tiny.gtf.gz
1ec5e129ea424597706f4b625327c69b *extdata/gen_tiny_anno.gff3.gz
84f6ae29496eb56652f373b91bfef183 *extdata/gen_tiny_anno.gtf.gz
220922b0d0b25aa599770ca139e2d2e1 *extdata/ref_tiny_anno.gff3.gz
3876ad19ba15f7f6bb3ec83c3d17ee9f *extdata/report_template.Rmd
ce00af6823086b157f1306d7e5f8af66 *extdata/report_template_slim.Rmd
4f72dbb833c45e8d9417b4bc3a0b4716 *extdata/simu_R1.fastq.gz
6b555e64cd9a0e3dbe416284e857fae2 *extdata/simu_R2.fastq.gz
4ed0ad3b7e96305927e6a2b8e995d2d7 *help/AnIndex
30380e7a84fbe0aeee2653f91a64e7c9 *help/aliases.rds
a929fbf24b2fb570c787aac127158657 *help/paths.rds
ebe6eda37eda8c65c86cf58b06eca79a *help/scPipe.rdb
64fe1d293aca291a5deffd90ce4a16bb *help/scPipe.rdx
5ee89c293a41c7c5fa7ae8adc0a24389 *html/00Index.html
4810cde6f05cb2492acff80f0cf8a263 *html/QC_metrics.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
7efae3bbebc22affef216d650fe29324 *html/UMI_dup_info.html
b11cf534a31f25b440bbd667af3a555c *html/UMI_duplication.html
6767e8e78ae3995256772a464a8c5a26 *html/anno_import.html
e6370de7b02dcdd7530e82531d8204e1 *html/anno_to_saf.html
bf0ba21a3b64d1c3726802eafa8caa8f *html/calculate_QC_metrics.html
ae3add628135f29801b57cd2735d84c3 *html/cell_barcode_matching.html
1e43e72c647b38d1e8bd4838cbdd66a9 *html/convert_geneid.html
3e31535053dfc56ae3c15fbe07caa709 *html/create_processed_report.html
134fbb30d3c436bd13290a8e05189bdd *html/create_report.html
ee706322cd4b6ca266585792ce0f2c6d *html/create_sce_by_dir.html
53898e7035f8ee150dece478436c8b6f *html/demultiplex_info.html
b35dac94b3d29411920ae28083eb69fe *html/detect_outlier.html
daf1f1380379a8ccec458beee3738368 *html/dot-qq_outliers_robust.html
73d100b9b6f5440dc15fddf7bd1dd7e7 *html/gene_id_type.html
3e250b54b81a8c1255a914ce6ebfd7f0 *html/get_ercc_anno.html
57e277c368d47137b716c908f02051a5 *html/get_genes_by_GO.html
c9b7aa0c098b2b2293dc8e1caf7e3a2d *html/get_read_str.html
b4340fa9aaa0f3d4ebd38f805d90c6f4 *html/organism.html
7a7b88b30ecc647a83a76508fcd82556 *html/plot_QC_pairs.html
4787ff65c9f6bf249eb1c38640022cf0 *html/plot_UMI_dup.html
f103b12e6921f5827ca80361b3541055 *html/plot_demultiplex.html
203ec9a1eef8a6c1f4822ee8dee6c41a *html/plot_mapping.html
99650d7f1de0dc6b1a8ff7425832c848 *html/remove_outliers.html
31f018b24418c4bf10e47ff0eaebf90c *html/scPipe.html
c33fe6d910f1216be3eb3ffe07d0c0d7 *html/sc_count_aligned_bam.html
9c524141c12aa8e454660403151f1c80 *html/sc_demultiplex.html
97a24ce4c470d14f0cea3f03f536e1d9 *html/sc_demultiplex_and_count.html
951119a23740b0ac6d2bf5297b881ae0 *html/sc_detect_bc.html
f084a22985cebbf99ea503fe7f4102f1 *html/sc_exon_mapping.html
4ea5f02aa43455aea66b7072e0ca874a *html/sc_gene_counting.html
bc4c95b17fc1e869e783d8fef25f8cbf *html/sc_sample_data.html
34dd57dcd81bf3b2452ac77921af6ab7 *html/sc_sample_qc.html
9658744576e800c33a7194aaec409f9e *html/sc_trim_barcode.html
0e0a18cee051a02c5f37760aab944350 *libs/i386/scPipe.dll
935fdca2dd3dbf0c4eb8df11b82f1113 *libs/x64/scPipe.dll
e17bcd270318aaaabf8568c328e3d59c *scPipe.png
a4e7b825ee1d624e008b5bcb4659e78d *workflow.png
