035625cac0f34938051687ebe9ad13a5 *DESCRIPTION
b57f1f87aaa983fa238ab1a4c1216bf7 *INDEX
93c9159d1d91d556ff7086d3a659de0f *Meta/Rd.rds
209dcba11bc9b42c6832ce2be499a492 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
e945139ac4202f1d647c5e7086c12509 *Meta/hsearch.rds
2b6d3c08829f3adf2458ed28964cd302 *Meta/links.rds
6b32ec3e8f4d2c431adc162c8e79ed48 *Meta/nsInfo.rds
a136d1cd00023c73a8b9c12010e5b66a *Meta/package.rds
b2aafabe6ced42d94d2a426eff296bcf *NAMESPACE
594c0d4f02b79551b089be17d3c83296 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/pwOmics
f7f4b89bef6a426678d21e6027827b9c *R/pwOmics.rdb
19fb65ffb81fb58d301f13f5d28e5fba *R/pwOmics.rdx
62f1951990e4a48b8e9576a63de2a20d *data/OmicsExampleData.RData
0173a6340a384e4863487ec72a92f25c *extdata/Genelists/Genelist_biocarta.RData
8ce73f94923b113e1b37341189cc1fa5 *extdata/Genelists/Genelist_kegg.RData
3966ca5db8518cdf31378969a73c53e7 *extdata/Genelists/Genelist_nci.RData
9f57a879f9965936a1ae43478a963a13 *extdata/Genelists/Genelist_reactome.RData
8212a0c9e1ddcbd8edbc9037b606eca5 *extdata/TF_targets.txt
98b206046ac2e5a7723f5b450b628003 *extdata/chea-background.csv
e179e6d1de61e0f377aef5c587e79401 *extdata/mat_phospho.csv
cbff0dfb526df4226b5903b7443c06f6 *extdata/phospho_anno.txt
1bfd415c150f248004e280346bdcd2fc *extdata/phospho_reg_table.txt
52bfb1275c60a7e2e3b2bbbb1bb348fd *extdata/transcriptome_signif.txt
c0a168a7153f25de41757b7fd6b64472 *help/AnIndex
d01486bd32fc829a3350c066d3b1c6ae *help/aliases.rds
62a559e5fd89bd8edf46c58e08a763f4 *help/paths.rds
95e7a8dcd258d5b6d97aba13d5937b51 *help/pwOmics.rdb
d25799b2455c5450df7a5c27aafbfa41 *help/pwOmics.rdx
064716aa38eecdc351414cea6c720680 *html/00Index.html
dd5164aeb17e2a418a9c75951e66ce9d *html/OmicsExampleData.html
764e0caf2aca752842a789ae30723a43 *html/PWidentallprots.html
7a117c6749d86b39a6299647d0c5ff84 *html/PWidentallprotssub.html
504c0bf499726262ba2a528a78e9d711 *html/PWidenttps.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9e0727b0cf91179bcdfa3eaa9a6912c9 *html/SteinerTree_cons.html
22ecb79bc3b6fb8736f880f6dc12103c *html/TFidentallgenes.html
95fabc57837dcad53774780885f5822b *html/TFidenttps.html
b467f2c4eef4117b3136a9ed7ee3b5a4 *html/addFeedbackLoops.html
5dc04bbaea9a4d120125efc297eead2f *html/clusterTimeProfiles.html
ce0a31a21e4da94573357690e1696ded *html/consDynamicNet.html
79f8205173482a7b127d084b41ab9b99 *html/createBiopaxnew.html
b3bd9568e675dd3ba66b368c898e1dfb *html/createIntIDs.html
be7abe92bc3f87b45283e1994f764445 *html/findSignalingAxes.html
95f33e8556a215fa751bf616cdc8a6b6 *html/findxneighborsoverlap.html
17f5503d3a9a5f4aa08675c3e3a26f6c *html/findxnextneighbors.html
645b43ea69bbfa4ee103c58888b23afc *html/genGenelists.html
f392aec869c707bd884b396e66a2a6c7 *html/genGenelistssub.html
117dd3b556ee0a4ced678f0db2d41205 *html/genIntIDs.html
cc660a8ee98d4ea411e53146807a0340 *html/generate_DSSignalingBase.html
19eab950ba5f84f1ea35581503ef2d25 *html/genfullConsensusGraph.html
7a3eae68ebad59875dd930ef68201e6c *html/getAlias_Ensemble.html
b4c704b9f661d98b528d241b80f758da *html/getAliasfromSTRINGIDs.html
15913d86d501d23c4b0f6d24abcb4de3 *html/getBiopaxModel.html
9f3b0eb64570abac06b2c5ab153e4a2c *html/getConsensusSTRINGIDs.html
51780a70558f9f6cefa543b962e6cf53 *html/getDS_PWs.html
071c1c2584a4e0bd6ef4c29d5937198d *html/getDS_TFs.html
29802c29cad3b0089ba7ccb518b08171 *html/getDS_TGs.html
977c68482f996c8114fcb6e8ebf1cae0 *html/getFCsplines.html
6b5c969d955d66e07fd1b9c5761a9153 *html/getGenesIntersection.html
51ea29632973a2f15669a44509a167a9 *html/getOmicsDataset.html
dbfdf938a9405f5451e6f8b5614305e5 *html/getOmicsTimepoints.html
be476726be5cae6c5de0de75f45df519 *html/getOmicsallGeneIDs.html
4ac57428b7e8195b7a468bf46d9b6a38 *html/getOmicsallProteinIDs.html
36fb18e64a9ebf1118753d6b7102e26c *html/getProteinIntersection.html
ed3c024ffc5bbb8427e9eed0e48318ac *html/getSTRING_graph.html
660fde6e73901f1a8513f14dfdbd1c02 *html/getTFIntersection.html
a1fbac8854603dc673bf5e5b88eccc01 *html/getUS_PWs.html
606b923970456b372110be6daad6b211 *html/getUS_TFs.html
15d4db22eb6c33bb8ccf640d52517507 *html/getUS_regulators.html
b92d5e1e9c6acad9aa6b7f3137c13b55 *html/get_matching_transcripts.html
c5c32a65e8eb3a3ec24e38f9709e2754 *html/getbipartitegraphInfo.html
4c193ed8aa53bf209f2fbde1a6b76bf5 *html/gettpIntersection.html
1553b929953dcf349d5c3fdab6634081 *html/identPWsofTFs.html
5b0698737643860e920fb4173dc85584 *html/identRegulators.html
d395598284cfe2d6dfaa9475b1b47709 *html/identTFTGsinPWs.html
e4d75753871d0d6d8194c2c206cf7297 *html/identTFs.html
28a0b48dbe7cfe08d62bda0592be922f *html/identifyPR.html
8a975ff6c582b6d0bfad3304bd4b399e *html/identifyPWTFTGs.html
e3b02d4ecd567e6a985e7bb45aa4b654 *html/identifyPWs.html
0e74d02183f70426a1466e6dfd20facf *html/identifyRsofTFs.html
bba0e32a4d9a2b738a026fa8196e51ba *html/identifyTFs.html
4ea0c804effd48c60391494c0ecb5594 *html/infoConsensusGraph.html
b3a6793becb05eed4539412a5beda0b0 *html/loadGenelists.html
06aed62adafb684dc770e83d5680ce58 *html/loadPWs.html
306f47b9b7cb32b6b8cdc7ee1b8022e1 *html/plotConsDynNet.html
0edf83375871d5ec720c16daae9a9216 *html/plotConsensusGraph.html
9146c223264c39bd076edcb0ce3812b8 *html/plotConsensusProfiles.html
8f8e7dfdbf631717bd265cace1fab102 *html/plotTimeProfileClusters.html
3b5ae2471e29b0b1c2694a1687ed8991 *html/predictFCvals.html
47f6fd8ea95a08e6f9d487d05b934059 *html/preparePWinfo.html
00a165ff1421b226618487e1b61811f2 *html/print.OmicsData.html
97a60076d6a9ddd06c160789fd9a2542 *html/pwIntOmics-package.html
aba95bf85992c15a64ee63729f7d51d2 *html/readOmics.html
2e2e8f9000edfd280b23533f20731a73 *html/readPWdata.html
8cd296f8a28321fdea356f4ba7b631f1 *html/readPhosphodata.html
74bc92ff1520d38abaad16cbd54a9d2d *html/readTFdata.html
f3ebd2b67d8c4839dad44db39ccd18f4 *html/readTFtargets.html
48b4b4d0154ce3795473086263fd0e6d *html/selectPWsofTFs.html
fbecd281efa9fe29293dc1af7c670909 *html/staticConsensusNet.html
f106d1b98bac61a214dc7e640d69bacc *html/temp_correlations.html
122cc06fcca219f21a1377b9d567c51e *unitTests/provided_TF_genes.txt
ecdaa851b286ef5c57d39631fabf5bcb *unitTests/pwIntOmics_exported.R
fe0a87544ccf51eb8843918e086046c7 *unitTests/pwIntOmics_internal.R
