Edges_Diseases_obj      get Edges dataframe for Gene/Disease
                        association from geNetClassifier
Mutation_obj            Atribute mutation frequency to nodes
Node_Diseases_obj       Attributes color and shape to Nodes of Diseases
Node_df_FreqIn          Attributes size to Nodes depending on number of
                        interaction
Node_obj_CNA_ProfData   Attribute CNA data to node border
Node_obj_FreqIn         Attribute interaction frequency to node size
Node_obj_Met_ProfData   Attribute gene Methylation to Nodes
Node_obj_mRNA_Classifier
                        Atrribute genes expression to color nodes
Studies_obj             get object for grViz. Link Studies to genes
UnifyRowNames           Unify row names in data frame with the same
                        order of gene list.
attriColorGene          Attribute Color to Gene
attriColorValue         Attribute Color to Value
attriColorVector        Attribute color to a vector of numeric values
attriShape2Gene         Attribute shape to nodes
attriShape2Node         Attributes shape to Nodes
bioCancer               Launch bioCancer with default browser
checkDimensions         Chech wich Cases and genetic profiles are
                        available for every seleted study
coffeewheel             This is an htmlwidgets-based visualization tool
                        for hierarchical data. It is zoomable, meaning
                        that you can interact with the hierarchy and
                        zoom in/out accordingly.
coffeewheelOutput       Widget output function for use in Shiny
displayTable            Display dataframe in table using DT package
epiGenomics             Default dataset of bioCancer
findPhantom             Check if PhantomJS is installed. Similar to
                        webshot
getFreqMutData          get mutation frequency
getGenesClassification
                        get genes classification
getListProfData         get list of data frame with profiles data
                        (CNA,mRNA, Methylation, Mutation...)
getList_Cases           get list of cases of each selected study in
                        Classifier panel
getList_GenProfs        get list of genetic profiles of each selected
                        study in Classifier panel
getMegaProfData         search and get genetic profiles (CNA,mRNA,
                        Methylation, Mutation...) of gene list upper
                        than 500
getSequensed_SampleSize
                        get samples size of sequensed genes
grepRef                 search and get genetic profiles (CNA,mRNA,
                        Methylation, Mutation...)
metabologram            Circular plot of hierarchital data of genetic
                        profile.
metabologramOutput      Widget output function for use in Shiny
reStrColorGene          Restructure the list of color attributed to the
                        genes in every dimenssion for every studies
reStrDimension          Restructure the list of color attributed to the
                        genes in every study for every dimensions
reStrDisease            Restructure the list of color attributed to the
                        genes in every disease
renderCoffeewheel       Widget render function for use in Shiny
renderMetabologram      Widget render function for use in Shiny
returnTextAreaInput     Return message when the filter formula is not
                        correct (mRNA > 500)
switchButton            A function to change the Original checkbox of
                        rshiny into a nice true/false or on/off switch
                        button No javascript involved. Only CSS code.
user_CNA                Example of Copy Number Alteration (CNA) dataset
user_MetHM27            Example of Methylation HM27 dataset
user_MetHM450           Example of Methylation HM450 dataset
user_Mut                Example of Mutation dataset
user_mRNA               Example of mRNA expression dataset
whichGeneList           Verify which gene list is selected
widgetThumbnail         Capture html output widget as .png in R
