app2gds                 Append a MethyLumiSet object to a CoreArray
                        Genomic Data Structure (GDS) data file
backup.gdsn             Copy gds node to a backup folder within gds
                        object
bigmelon-accessors      Bigmelon accessors
bigmelon-package        Write large-scale Illumina array datasets to
                        CoreArray Genomic Data Structure (GDS) data
                        files for efficient storage, access, and
                        modification.
bumphunterEngine.gdsn   Bumphunter using bigmelon
cantaloupe              Small MethyLumi 450k data sets for testing
combo.gds               Combine two different gds objects.
dasen.gds               Bigmelon Quantile Normalization methods.
dasenrank               Dasen Quantile Normalization by storing ranks
es2gds                  Coersion method for MethyLumiSet, RGChannelSet
                        or MethylSet to CoreArray Genomic Data
                        Structure (GDS) data file
estimateCellCounts.gds
                        Cell Proportion Estimation using bigmelon
finalreport2gds         Read finalreport files and convert to genomic
                        data structure files
gds2mlumi               Convert Genomic Data Structure file to
                        Methylumiset or Methylset object.
geotogds                Download GEO data and pipe into a gdsfmt object
getquantilesandranks    Compute the quantiles and ranks for a given
                        gdsn.node
iadd                    Add data from IDAT files for a single barcode
                        to a gds file
pfilter.gds             Basic data filtering for Illumina methylation
                        data in gds objects
prcomp.gds.class        Principal Component Analysis for
                        high-dimensional data
pwod.gdsn               Probe-Wise Outlier Detection
redirect.gds            Change the location of file 'paths' for row and
                        column names.
wm-port                 Functions ported from wateRmelon
