d899626bfdd384dd91c8b8199e8faa4f *CITATION
34664c1ab8c45b30e8f8118fa12102ae *DESCRIPTION
e8590c21ca5e59f97ba8a4f64e4ddec0 *INDEX
952e8611df1ed14689d1f3d458e2c43b *Meta/Rd.rds
ae90aeca7027afeaefecf7df9cebb3f4 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
9140e72158a652f04558aa0149831ce4 *Meta/hsearch.rds
af398cfd72003d9dc82988f926d4580a *Meta/links.rds
f1621f8a9f45f191895ccf197badcb09 *Meta/nsInfo.rds
03ff51e68b7eec40a9fd3e6a1ad14c37 *Meta/package.rds
67616d5fc0a5526b26c571612b9510c1 *Meta/vignette.rds
49ac124b0d4a80bf7dc47b79715e3f68 *NAMESPACE
c37a4f5f2a74fcbf3abf08197ae6ad4b *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/RCAS
bcc28102c2ed1c8dd1aed6bb2bf0d2af *R/RCAS.rdb
d2d1c24f3f86a687040e57d399b3cf40 *R/RCAS.rdx
c73372aa3517dcb980dbf5289f766c30 *data/Rdata.rdb
0cb9ea3f1acda9c31fb744f835e0b2ac *data/Rdata.rds
691f6acb7c24ab3cdaee2aa181300448 *data/Rdata.rdx
2c0fc3deefcbcf2a786efa6d7b56e189 *data/datalist
2077b16a28c9acba8e80be8fb64ee38e *doc/RCAS.metaAnalysis.vignette.R
fe54a2d6bc82f877aea6d5309fd7b999 *doc/RCAS.metaAnalysis.vignette.Rmd
6fe81c91891307fc341b9b4d5ede50bd *doc/RCAS.metaAnalysis.vignette.html
03d0870863a622109453f2f188ef60b2 *doc/RCAS.vignette.R
eae14c71cd3106b4a2c54d86bee3ead6 *doc/RCAS.vignette.Rmd
d7f86478a554ac49315f4f2ae99ad63c *doc/RCAS.vignette.html
247e560902e4d56eb3cc2fe9bec32180 *doc/index.html
4f8573e5f8b697319117c88327a4a236 *extdata/EIF4A3Sauliere20121a.bed
2779ca3ab60fcb8e560e86978c5aa1d2 *extdata/EIF4A3Sauliere20121b.bed
32aa8a32aa4b0b1b69dd340437d6e924 *extdata/FMR1_Ascano2012a_hg19.bed
d4d7442832f9b1d40ed3bb589326839a *extdata/FMR1_Ascano2012b_hg19.bed
5ae985d0d00b8dbc5c4e51481d2799b4 *extdata/FUS_Nakaya2013c_hg19.bed
53ec61cdf36a09a61f64ca31fdf0a0ae *extdata/FUS_Nakaya2013d_hg19.bed
2af4c54bf647b7e46dec40972101443e *extdata/hg19.RCASDB.sqlite
f0de64b19c59a7b202c8faff4d599ace *extdata/hg19.sample.gtf
99fb8d5b4e2fc1a11b4e92d5bd994d05 *extdata/hg19.sample.gtf.granges.rds
aa87ec9a0e15f7849d72747634b911ce *extdata/msigdb_test.gmt
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile.bed
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile2.bed
5c2561dda8172f73b4b71fc28d36768c *help/AnIndex
6e0d29ed9623c280c37fec953175213c *help/RCAS.rdb
20d390c023bd1b1fcab7566b622b970f *help/RCAS.rdx
3f31c83a32596dfd8a90bf733fa45f69 *help/aliases.rds
44968184787d44f929e5039c4bb5dc5c *help/paths.rds
f0ab5f894b7d9342fe1fddfa88496e91 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
6341071689bc8c0074e79ea950bcd669 *html/calculateCoverageProfile.html
2e963864cf58290e8b7c9961a119aa9c *html/calculateCoverageProfileFromTxdb.html
3bc5ae7f27899aed98dd786bfbbfc1b0 *html/calculateCoverageProfileList.html
1562e016f8175c77233a9af583ff7eb7 *html/calculateCoverageProfileListFromTxdb.html
e5dc09eb0b8598d5dd063cf7df10cc6a *html/createControlRegions.html
e1d635b2da3da83d454c554d1c0909d3 *html/createDB.html
186280ddc8eb24e65030d64e843302d0 *html/createOrthologousGeneSetList.html
8e99f6f542a74cfc3f7585496ddda717 *html/deleteSampleDataFromDB.html
24aad4c606089aab02d45e270aec4cbb *html/discoverFeatureSpecificMotifs.html
f0b9f7826674296adeed8ac7dde1f525 *html/extractSequences.html
4a80ab25de49560d761f9f1a95399042 *html/geneSets.html
ef8966b153277de8624e79268da65e56 *html/getFeatureBoundaryCoverage.html
b82660b8ab86390f6b669b0325842d59 *html/getFeatureBoundaryCoverageBin.html
bc796b4bbbd97d5c84167f438f4e568c *html/getFeatureBoundaryCoverageMulti.html
b1517adec01ea87ee1d5ede227bc0dc0 *html/getIntervalOverlapMatrix.html
e9de0a9f79bdb8ef1eced9d649d4870f *html/getMotifSummaryTable.html
100b17aae03ae18828edcb0821111304 *html/getTargetedGenesTable.html
da1f87be192a0bfe3327845dbc2e3a5d *html/getTxdbFeatures.html
f7397ea2288e1c07158ac11acd4715a5 *html/getTxdbFeaturesFromGRanges.html
c7bb61628cffda4a960396f947d8c03d *html/gff.html
ef1f1ac529ad4089704db70760a459f7 *html/importBed.html
2d8ca8c881971834411181accb337c7c *html/importBedFiles.html
2314899d2cc8fd1f6b5a7dfadac83c1c *html/importGtf.html
b489c0ac3263df6b667d18dc3e7895e0 *html/parseMsigdb.html
554558b1932ffb85c75bb2239bce04ad *html/plotFeatureBoundaryCoverage.html
d66d5e864674b1c24d5bee7ea6c62e62 *html/printMsigdbDataset.html
2e8fa71c7a1e20377078640d84e78458 *html/queryGff.html
788eb1ee3ba81bb232fad9a0effc803a *html/queryRegions.html
db75db8c1a03f41fa7ab2802814ef352 *html/retrieveOrthologs.html
591086b2a2f3de06bc4e3d20e400b786 *html/runGSEA.html
fd3b580b311b32d8034db714d96255b6 *html/runMotifRG.html
27eb696dd6c612013378e5885e4373d2 *html/runReport.html
a6e1f5760c18b7fb309247e556576792 *html/runReportMetaAnalysis.html
27077f744c8b86f46a0347418f3a0b60 *html/runTopGO.html
718f10fb4a6e92656bd4f53a89bba27b *html/summarizeDatabaseContent.html
bdba1d86c862a98139e6b6522343f1c5 *html/summarizeQueryRegions.html
032b9f2b05078c51e68db77b892d5747 *html/summarizeQueryRegionsMulti.html
053cf68e09070e277a798b0736fb7874 *reporting_scripts/footer.html
b1442cb874099cb5af45301431024ee0 *reporting_scripts/header.html
ca9f8bbe5141ee97943aadede0fac8d1 *reporting_scripts/report.Rmd
e6ab695c29d907c81228c883e5af619c *reporting_scripts/reportMetaAnalysis.Rmd
