getTxdbFeaturesFromGRanges {RCAS} | R Documentation

## getTxdbFeaturesFromGRanges

### Description

This function takes as input a GRanges object that contains GTF file contents (e.g from the output of `importGtf` function). Then extracts the coordinates of gene features such as promoters, introns, exons, 5'/3' UTRs and whole transcripts.

### Usage

    getTxdbFeaturesFromGRanges(gffData)

### Arguments

`gffData` | A GRanges object imported by `importGtf` function

### Value

A list of GRanges objects

### Examples

    data(gff)
    txdbFeatures <- getTxdbFeaturesFromGRanges(gffData = gff)

[Package RCAS version 1.12.0 Index]