findFa {ORFik} | R Documentation

## Convenience wrapper for Rsamtools FaFile

### Description

Get fasta file object, to find sequences in file.

### Usage

    findFa(faFile)

### Arguments

`faFile` | `FaFile`, BSgenome, fasta/index file path or an ORFik `experiment`. This file used to find the transcript sequences

### Value

a `FaFile` or BSgenome

### See Also

Other utils: `bedToGR()`, `convertToOneBasedRanges()`, `fimport()`, `fread.bed()`, `optimizeReads()`, `readBam()`, `readWig()`

[Package ORFik version 1.6.9 Index]