codonSumsPerGroup {ORFik} | R Documentation

## Get read hits per codon

### Description

Helper for entropy function, normally not used directly Seperate each group into tuples (abstract codons) Gives sum for each tuple within each group

### Usage

    codonSumsPerGroup(grl, reads)

### Arguments

`grl` | a `GRangesList`
`reads` | a GRanges or GAlignment

### Details

Example: counts c(1,0,0,1), with reg_len = 2, gives c(1,0) and c(0,1), these are summed and returned as data.table 10 bases, will give 3 codons, 1 base codons does not exist.

### Value

a data.table with codon sums

[Package ORFik version 1.6.9 Index]