getDefaultDataOptions {MOFA} | R Documentation

## Get default data options

### Description

Function to obtain the default data options.

### Usage

    getDefaultDataOptions()

### Details

The data options are the following:

- scaleViews: logical indicating whether to scale views to have the same unit variance. As long as the scale differences between the data sets is not too high, this is not required. Default is FALSE.

- removeIncompleteSamples: logical indicating whether to remove samples that are not profiled in all omics. We recommend this only for testing, as the model can cope with samples having missing assays. Default is FALSE.

### Value

Returns a list with the default data options, which have to be passed as an argument to `prepareMOFA`

### Examples

    DataOptions <- getDefaultDataOptions()
    DataOptions

[Package MOFA version 1.2.0 Index]