7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
87cafe31c548abc179c9151aa57159f8 *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
91b9fac0c4e9f3fc9dd4b08191181ef4 *Meta/Rd.rds
318caf2a57071b5f739bda6948c19004 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
124a85a8e8c175564612d0e8b5ac2fd2 *Meta/hsearch.rds
cc6df4b50252a6f0ab7aaf311bf336d1 *Meta/links.rds
9b81a6c5bc207f35c6dfbde038439a4b *Meta/nsInfo.rds
2294a1b3c1f5fa9f60ec3f3538dc4e76 *Meta/package.rds
5a417e59d508c6ab4203666a1ff634ca *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/MADSEQ
7b6865fcf3e5082f2f756b12d4b2d815 *R/MADSEQ.rdb
0d6f35fbaf6635be9bda027b53398350 *R/MADSEQ.rdx
bab36748ba8666849f8342b143e67035 *data/Rdata.rdb
0e544cc5abff88abb941729cfa4d4547 *data/Rdata.rds
f95ddafd215eefea2f1775249b69ef21 *data/Rdata.rdx
c8b39fb1864574e045aecb513d6d1f5f *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
70dcc4a9e50c3bb0b8407d3dcad48db3 *doc/MADSEQ-vignette.html
8d2a12cbcba7e2d17c0a7f5e2ce7d491 *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
173cb47cecb7848b8b3fae4d548bcd4a *help/MADSEQ.rdb
038b93b09d20f6b636ccf45279b9ea76 *help/MADSEQ.rdx
e07fcdc9f69d248585f939370e6716a8 *help/aliases.rds
aed8028f602590105013ae6c5fdb1d54 *help/paths.rds
c28d998814cb76a035f543b26b1ea19c *html/00Index.html
5c6ebdcc15e36e2833191abeee24666a *html/MADSEQ-package.html
4ee7c7f8a62abeac8f72f0ebfa05d179 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
2a5fd5457ed5648d96254ba0704602bb *html/aneuploidy_chr18.html
b5c166de62f3c5c8dbb92687fce8794f *html/deltaBIC.html
758d802729761e6303ab439c545601e3 *html/normalizeCoverage.html
b0b5ca7e3c022e6621bc702a00e2d26f *html/plotFraction.html
442e05fae2b9f6a90f6ba73789a6cd36 *html/plotMadSeq.html
2e828b98c1f757cc13e400a982986cdf *html/plotMixture.html
963fd778c461a32f27220b59fa77d4ce *html/posterior.html
715493db7b1215c27e11cda65d8b3731 *html/prepareCoverageGC.html
3a917457b5a59cebb058cc6aecbc37a5 *html/prepareHetero.html
b39476cf594b512761d2f7ca33953ccf *html/runMadSeq.html
51418d6c0f57d9f66e556f95eff0e114 *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
