Package: ImpulseDE
Type: Package
Title: Detection of DE genes in time series data using impulse models
Version: 1.12.0
Date: 2016-06-16
Author: Jil Sander [aut, cre], Nir Yosef [aut]
Maintainer: Jil Sander <jil.sander@uni-bonn.de>, Nir Yosef
 <niryosef@berkeley.edu>
biocViews: Software, StatisticalMethod, TimeCourse
Depends: graphics, grDevices, stats, utils, parallel, compiler, R (>=
        3.2.3)
Imports: amap, boot
Suggests: longitudinal, knitr
Description: ImpulseDE is suited to capture single impulse-like
        patterns in high throughput time series datasets. By fitting a
        representative impulse model to each gene, it reports
        differentially expressed genes whether across time points in a
        single experiment or between two time courses from two
        experiments. To optimize the running time, the code makes use
        of clustering steps and multi-threading.
License: GPL-3
LazyData: TRUE
RoxygenNote: 5.0.0
VignetteBuilder: knitr
URL: https://github.com/YosefLab/ImpulseDE
BugReports: https://github.com/YosefLab/ImpulseDE/issues
NeedsCompilation: no
git_url: https://git.bioconductor.org/packages/ImpulseDE
git_branch: RELEASE_3_10
git_last_commit: 780d53b
git_last_commit_date: 2019-10-29
Date/Publication: 2019-10-29
Packaged: 2019-10-30 03:39:05 UTC; biocbuild
Built: R 3.6.1; ; 2019-10-30 13:30:24 UTC; windows
