deepblue_list_biosources {DeepBlueR} | R Documentation

## list_biosources

### Description

List BioSources included in DeepBlue. A BioSource refers to a term describing the origin of a given sample, such as a tissue or cell line. It is possible to filter the BioSources by their extra_metadata fields content. These fields vary depending on the original data source.

### Usage

    deepblue_list_biosources(extra_metadata = NULL,
      user_key = deepblue_options("user_key"))

### Arguments

`extra_metadata` | - A struct (Metadata that must be matched)
`user_key` | - A string (users token key)

### Value

biosources - A array (biosources names and IDS)

### See Also

Other Inserting and listing biosources: `deepblue_list_similar_biosources`

### Examples

    deepblue_list_biosources(extra_metadata = list(ontology_id = "UBERON:0002485"))

[Package DeepBlueR version 1.12.0 Index]