1cc00c4cda5e6d81e7b60de12ba7f841 *CITATION
490eae25215ce2e759de00f618170de6 *DESCRIPTION
40b332d4eb1688a0f94e73d97b7ec78a *INDEX
90a5a361e2ee669454212a33abfb94be *LICENCE
a05e9958f568eaa362e3ac24728d7ed3 *Meta/Rd.rds
d69a6eb0ef2c451aef5e4e051863b134 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
ed31b31d3dfba1e758f0fd3e0b3de4cf *Meta/hsearch.rds
f1c425b9501c60cb29434d83f6ef4a1c *Meta/links.rds
07505ae5aaeed1a25d1918a7a8dd52e0 *Meta/nsInfo.rds
cb0b6ea144251e6765b6a2c8e8b44d52 *Meta/package.rds
a8444e874465e4453c4efec9dcdda6b5 *Meta/vignette.rds
93404f1e03f601fc2c32d242d9e800d1 *NAMESPACE
c12d36dd28e1e039b5e59c0913566882 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/DChIPRep
94aa4f40a90e3d718b78681c58e6b246 *R/DChIPRep.rdb
c2251da89ec5a8ad7e4f2bc19b8010d5 *R/DChIPRep.rdx
586f4325fd5f9d00bdc71b4d7f6fa1f3 *REFERENCES.bib
e41d7da8b9f59e3ea090345aa9e3e8cb *data/Rdata.rdb
803ea59e7ba22ddf4f1ec1f8ce6a8d0c *data/Rdata.rds
8adf027c436e1ce47ae8d5cb92829296 *data/Rdata.rdx
4adbc252e9da501efa24eb046611c147 *doc/DChIPRepVignette.R
24a72c306e605cbd39036bfae1fd10d8 *doc/DChIPRepVignette.Rmd
01326515fe3036d7c0e22a4c8787ad2c *doc/DChIPRepVignette.html
2c62f2a90a4071b2cba63fcc82ed9876 *doc/index.html
fc6b649812959489432dea8b79ad7e22 *exec/DChIPRep.py
e4cbd1b84aec42dc495e9d358efe38f9 *extdata/BY_conf_K4me3_1__ORF_count.txt
a244a49d9e54aa8b33ea9c27b449efd1 *extdata/BY_conf_K4me3_2__ORF_count.txt
134e18cf2217983319a9c803ae32b5f5 *extdata/BY_conf_K4me3_3__ORF_count.txt
636d9760c80f3c27e35cd6ff2c502258 *extdata/BY_conf_WCE_1__ORF_count.txt
f80e4077caea40ea668467cc7e59b265 *extdata/BY_conf_WCE_2__ORF_count.txt
f96ab7e83afba76b18115f904419dd09 *extdata/BY_conf_WCE_3__ORF_count.txt
e0dc223dd119ca6e67266500c7999ffb *extdata/SET2_conf_K4me3_1__ORF_count.txt
ec40d79f0c6939b792189c9dfaf624af *extdata/SET2_conf_K4me3_2__ORF_count.txt
f6e1b7e21960f9fd9a6320b005722313 *extdata/SET2_conf_K4me3_3__ORF_count.txt
8a337a7280a1db1f92bad381b2044335 *extdata/SET2_conf_WCE_1__ORF_count.txt
9e6d5210fbb010db3774d1801a610d09 *extdata/SET2_conf_WCE_2__ORF_count.txt
cc1bb67c22e74d69d2a39a24b0df884a *extdata/SET2_conf_WCE_3__ORF_count.txt
652dfe5e622f513c20f360878f7a28a7 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam
f0467a9f4563a5157f6e0443ab746d26 *extdata/subsampled_0001_pc_SRR2144628_WCE_bowtie2_mapped-only_XS-filt_no-dups.bam.bai
b7823fd346f023e863fd023e6b87611f *help/AnIndex
3b874db6771bc44b8bd0be3b18159251 *help/DChIPRep.rdb
644f9fbab8a0dc8c58962da16aeedfac *help/DChIPRep.rdx
6dcc33436225ae40f1229be92141ab86 *help/aliases.rds
d08eec703ec3b321345347974fb4603a *help/paths.rds
3d84c694d682803bd37d8f4ab402dd2f *html/00Index.html
37025266113a3aeb89ac968b1aa53bff *html/DChIPRep.html
11a344518b1a637939f7389d8c6ef890 *html/DChIPRepResults.html
e36f3b29e5ca4309ff587ae57c599d3c *html/DESeq2Data.html
f52cf64b7d152523fea7705c1b5f81f6 *html/FDRresults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
684ee0854ebeb5eb617ee44be890ddc2 *html/TSS_galonska.html
2e16880e11a14bbc590b6fb262c90460 *html/chip_galonska.html
fdbb2c5743c27244908790141ee69af2 *html/exampleChipData.html
65db413721f050987c6abca74c19ce99 *html/exampleInputData.html
4f1b81dcbd352f5f6516404e1c330fed *html/exampleSampleTable.html
286d982419ce81e7cacfbdd6bea5b490 *html/getMATfromDataFrame.html
a0b143d6618c5db9faeb467db9af603b *html/importData.html
ec29c9d0b5c2cde48fa6dee5ff1fb4e6 *html/importDataFromMatrices.html
b0105063d1b3ae38d718293c5ebd849e *html/importData_soGGi.html
98555e62cb7b04b3b59128f11bf84950 *html/input_galonska.html
91e7a31dfd7d6ca65c1963636b061557 *html/plotProfiles.html
6a74838163e2006eeb0164fc34e6c319 *html/plotSignificance.html
eaa642b1784ca077491c4cebf56dd86f *html/resultsDChIPRep.html
b0fdf844f7acb06e8d47b28a55c9e11f *html/robust_mean.html
2c605e14217e868c2344a72f364a0a19 *html/runTesting.html
cfd0f882bd6364317a22233c0e309aa8 *html/sample_table_galonska.html
910d541fd306100b04c93a0723e84165 *html/show.html
81c84282afefb1e61ccadeecc82cd7a6 *html/summarizeCountsPerPosition.html
fa1ee9d50bfa0ad7e9267667147c1020 *html/testData.html
