peaks-methods {ChIPQC} | R Documentation

## Retrieve peaks

### Description

Retrieve peaks.

### Methods

`signature(object = "ChIPQCexperiment")`

  Retrieve a `GRangesList` of the peaks associated with all the samples in an experiment.

`signature(object = "list")`

  Retrieve a `GRangesList` of the peaks associated with all the samples in a list of ChIPQCsample objects.

`signature(object = "ChIPQCsample")`

  Retrieve a `GRanges` object containing the peaks associated with a sample.

### Author(s)

Thomas Carroll and Rory Stark

### See Also

ChIPQC-package, ChIPQCexperiment, ChIPQCsample

### Examples

    data(example_QCexperiment)
    expPeaks = peaks(exampleExp)
    length(expPeaks)
    peaks(QCsample(exampleExp,1))

[Package ChIPQC version 1.22.0 Index]