303d2e8c0fce4a2456141fdcf394e5cc *CITATION
c4bb80b47be4f8cbf8f29e36c5792f99 *DESCRIPTION
371a7b136f4c7def3576a241c85f4b00 *INDEX
51e9bdcd481af97241d0ab956ac4fcde *Meta/Rd.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
77d719d9d53094c09bd50fa60ef37046 *Meta/hsearch.rds
71f977b9699c4132decb13e2a71a867d *Meta/links.rds
f62d1f1d35d68e420b44d0005b89512a *Meta/nsInfo.rds
8ed2d53f380e5da478a65067a84cd5d3 *Meta/package.rds
4a6baa9c2ea20d005d4d431f12110d03 *Meta/vignette.rds
0bed6e8990603ff5d64dca3de540023c *NAMESPACE
75ce80dc6e6569ec62daf48fa7a873f6 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CNVRanger
ed582b07c49296dba12790ef83a1012c *R/CNVRanger.rdb
c5d66136e079a9d23e2cc0e38694a668 *R/CNVRanger.rdx
7080b6613811885b93c07ea5677e2a67 *doc/CNVRanger.R
88b2472ac287e6b3650b85b1835a4df9 *doc/CNVRanger.Rmd
715835f2253ae9dc33fe15dbf44af2c0 *doc/CNVRanger.html
62d8a52b9a30efa127c214852ac82ec2 *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
713abee64c3061a622c3b36671474505 *help/AnIndex
dd2695554f8423025aeea770e954db76 *help/CNVRanger.rdb
691dc94ab3429ab2a3a3c32a2c50e752 *help/CNVRanger.rdx
75ca1c4d1c5642a1e3f6d7bbb34f47f4 *help/aliases.rds
0d752e64d15d8c6e7b9b5d7bfc9ccdea *help/paths.rds
22f16d59d517cbb340fd8759dae119e6 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
83f49ff93eabdb630934d7a9f17a1679 *html/cnvEQTL.html
969b0dc2ed09cdcf2f6b9fd2b47cbdbc *html/cnvGWAS.html
b7d0aa894338bd4b8730cf04589ce96a *html/generateGDS.html
6b698392e2c84317d8fb5eceb1bc01a7 *html/importLrrBaf.html
b30284f1416dc45322121fc7d354d163 *html/plotEQTL.html
fe18c6574e25a1a714b74afc6c8a8b0d *html/plotManhattan.html
dd675320be0966749c6e45489f3483a5 *html/plotRecurrentRegions.html
ff33c893ccb06cfc511f08d006f8c26c *html/populationRanges.html
6ca542b275354c7943cbe0dfdb436942 *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
