67aa7d249f01b5131e5928f1df65a97f *CITATION
23683fb0c8e2757bca34bb1dccf87e7b *DESCRIPTION
3c517241f126089cef17abbf71ca3a6e *INDEX
e7e8860fdecb44b0fe015b06fe43d23e *Meta/Rd.rds
05e90e7e816b049476678fcd39679db8 *Meta/hsearch.rds
fb48098d1792e75a344c6b811873aec9 *Meta/links.rds
6cb420db1e822de02e5b3e17b0b6930e *Meta/nsInfo.rds
e36fd704fb026b0e0f6a808d64c2258b *Meta/package.rds
f2d923ddfa576a13e80dfc03693ee370 *Meta/vignette.rds
f1e841e6248bc419a9389c82a1da35c4 *NAMESPACE
fec78f93d60f7e84a14d60a8fc67f2e3 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/VariantAnnotation
7da0efb300e7506520e8d71c0a7197f2 *R/VariantAnnotation.rdb
51753382f9683eb55c03ad0c7ef0d5d9 *R/VariantAnnotation.rdx
53874bf06325da2b4f1c46f326fd6b9c *doc/VariantAnnotation.R
19bb2b5dbf8d1913e1868f59615cd8b6 *doc/VariantAnnotation.Rnw
8fc5bfe8cbd466a5518839974fb02fd3 *doc/VariantAnnotation.pdf
c465e58e0ff84f6a2817c7669a95d69b *doc/filterVcf.R
03afeddc60c45b8fe3ca909e418bdfa6 *doc/filterVcf.Rnw
d4475608a237d037a7841040a2584a44 *doc/filterVcf.pdf
1ce21672d4fbc3b398047c5401199568 *doc/index.html
be4950fb484e1070402e189e254b1a92 *extdata/chr22.vcf.gz
c303d8a0cc7e6314b5f42348221b0d3b *extdata/chr22.vcf.gz.tbi
a4ca21413e322997ed17c5429e65b9ca *extdata/chr7-sub.vcf.gz
dc5c0ecc784ff39509a164f3020b72f8 *extdata/chr7-sub.vcf.gz.tbi
b325a60a320b6aebb41d41d1dafb9c6d *extdata/ex2.vcf
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
f2a805083bd71e155f977ffb49df2cd5 *extdata/h1187-10k.vcf.gz
fab30e49f0d054d462f8e1737844b204 *extdata/h1187-10k.vcf.gz.tbi
48852d332eb21dd639b4c6be53762357 *extdata/structural.vcf
0d3effbc0451836842a1d6a811cba70a *help/AnIndex
e2c224ab08c4dbef656a5dac2e5e8cac *help/VariantAnnotation.rdb
014d528ed8e34fb41b7f770ebcc50543 *help/VariantAnnotation.rdx
41f414229823a38916b4ede02890f5e3 *help/aliases.rds
9808496ce82b070626dcc93c66f3a8cf *help/paths.rds
bc73cb9f2e3de377288f2dcc7a29002f *html/00Index.html
0629445e5f3de06acbaf6e4013c7deca *html/R.css
78784158bb27f259c342078942b047ba *libs/i386/VariantAnnotation.dll
052b1a76fc8256f633efb2da9a8b718c *libs/x64/VariantAnnotation.dll
17f1c6f05e7a9ff7756b6efabce3f745 *scripts/test_Rplinkseq.R
b7a9592a5de31dd84a3f7e8d1e0332de *unitTests/cases/FORMAT_header_no_SAMPLEs.vcf
6e6064d7c429a35bc80235a253eed6f3 *unitTests/cases/VarScan_header.vcf
0c5f14796bf4eb3683ceff8e559f43d7 *unitTests/cases/banded_gvcf.vcf
1e72c29c93e39910d59e569aad8db3db *unitTests/cases/expand.vcf
b94fb85e5ef300d87ab437d75f899b5a *unitTests/cases/fewer-FORMAT-than-GENO.vcf
3e81314c823a90ca24120330c546e7b0 *unitTests/cases/missing-FORMAT-metadata-elt.vcf
ba4c3b28d5f63740fda11e70a19eccd7 *unitTests/cases/mixedStructural.vcf
0230db3391a4a664fd5e2236fd0e5a92 *unitTests/cases/multiple_INFO_fields.vcf
752d9d47c17d8f66791ce8804d88dbf6 *unitTests/cases/negative_FORMAT_Number.vcf
39d8ae8aa155e4bac07e9215017143e7 *unitTests/cases/no_FORMAT_column.vcf
4be0f539f13136116e1df4292adeb571 *unitTests/cases/no_GENO_row.vcf
a99d3b281abdd928c30fd147de3848a0 *unitTests/cases/no_INFO_header.vcf
0c5bd63cfafbad13a8591b4963e0d411 *unitTests/cases/unspecified_INFO_FORMAT_fields.vcf
3756faae9d9fbb654d7e48ae94a4d08a *unitTests/test_SIFTandPolyPhen.R
00158d8fd4f8a5d3b57b6ffd6568a17e *unitTests/test_ScanVcfParam-class.R
a1da597e6a4bb83fb36ebb07dec5576d *unitTests/test_VCF-class.R
0c04836595400ec35f40ff753728e661 *unitTests/test_VRanges-class.R
ff0b44d8aee8150a56bff44075467583 *unitTests/test_expand-methods.R
69b44e6a8eaab975040ec9b198f62ed8 *unitTests/test_filterVcf.R
d51b86a264c89d287ab21d6195e94215 *unitTests/test_genotypeToSnpMatrix.R
2c2205ed5a0c6d352887365ce90f025a *unitTests/test_isSNV.R
5d16e8e22f050a7b8dd2af481bd1aceb *unitTests/test_locateVariants-methods.R
c6735925be893a672350379067b69661 *unitTests/test_predictCoding-methods.R
f674942fdd74339349c66154a0a324e2 *unitTests/test_readVcf-methods.R
8a458cb30b5ba3091fc1f4f7657fdfd4 *unitTests/test_scanVcf.R
e45debe5cc9e5a797032c5ece476a74c *unitTests/test_snpSummary.R
2c1e20a06ce85cb2c363d019d0e21b5f *unitTests/test_summarizeVariants-methods.R
50624bfb1f2bba24315a654d439ba5af *unitTests/test_writeVcf-methods.R
