d3e180e0ed28ba36feedcd7290a13e43 *DESCRIPTION
ca7360627a3a58e48c5b50f0f134cc0d *INDEX
9b25954e3e36e3fe8ba9996acce2f957 *Meta/Rd.rds
01a10bd199516d2bc361d891daebdcf2 *Meta/data.rds
02858193802a3c652316090682a9bf7e *Meta/hsearch.rds
0b54d7c2c412b859b25cd102dc0fb951 *Meta/links.rds
1172350d105e38d378e8797465451217 *Meta/nsInfo.rds
4458136163ea089bccfb11d0b6f16714 *Meta/package.rds
ecb7e76f98443a4e7d8f5684bfffcebf *Meta/vignette.rds
21066cbe586c48ecb3ea61090f039621 *NAMESPACE
3a5fbb3686117c9533c9649b898fb26c *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/Biostrings
283692ef7353633ed50a8975f67a38cc *R/Biostrings.rdb
f046505b937807e8c82476e6901ab1ee *R/Biostrings.rdx
fb21544885b0d8e223dc707a19f703a6 *data/BLOSUM100.rda
370ae409745a34652b50f6c0992a7c36 *data/BLOSUM45.rda
ff21fdf7ae6c26d41265485e06678c47 *data/BLOSUM50.rda
938f1640bbcee65ce83726127c8efa8f *data/BLOSUM62.rda
ec70a69370ee7b924a1521bd22a0b92a *data/BLOSUM80.rda
4bb649b15a1c70fdc6beb4ea37ca8d58 *data/HNF4alpha.rda
b85025df056de88ad4e0ec260b4fbd3e *data/PAM120.rda
d790bbcef52f77bdbac03ca4fe317a0d *data/PAM250.rda
5ab6a6fb04f2bb2011c96abdea970b87 *data/PAM30.rda
d234baa0914f6233478aa0687fdbe10c *data/PAM40.rda
8533b9535b841e231b9babd78d584885 *data/PAM70.rda
d1f902614de1a9eba90d8387690c2688 *data/phiX174Phage.rda
ea5bd4d16695006aab9061c351649bb6 *data/srPhiX174.rda
e566417a897993c19e4b81e517778b6c *data/yeastSEQCHR1.rda
e919d958d2d4591086ade82640727b72 *doc/Biostrings2Classes.R
d7f69eedb9db937ef0b727cd1d558b8d *doc/Biostrings2Classes.Rnw
16becc937f3298afa10b30ff29157281 *doc/Biostrings2Classes.pdf
22d58e22ff1471f38f0c65b9c729d7c5 *doc/BiostringsQuickOverview.Rnw
a1a79447048f47bdf95aa89f548fc213 *doc/BiostringsQuickOverview.pdf
ebaaf15e9ad9332cc13c3b3a26b47c8a *doc/MultipleAlignments.R
61f53dbee2860c3e5cd6924d8e158129 *doc/MultipleAlignments.Rnw
100fd9c8d48d49fd50831cda9457f637 *doc/MultipleAlignments.pdf
c5534c2d0ccf4c2540b45f56110c1bb9 *doc/PairwiseAlignments.R
8bedd825a4ccb05be73053f55ee63acc *doc/PairwiseAlignments.Rnw
e8807c48d97ca762bc1e99372391a1f6 *doc/PairwiseAlignments.pdf
c927893175dbc824dcc8d9c7e8654d6d *doc/index.html
7d038597048fefbc1cbd6ce356a58696 *doc/matchprobes.R
b239f15493ac1bc5ab95d1afd25a2b28 *doc/matchprobes.Rnw
178638b5979ec35768a310d508952fd2 *doc/matchprobes.pdf
78e8db3ebcbc095287e6fd8ccfe0e1a2 *extdata/Phylip.txt
886d5e4badeaeee2de9e4481e5bc0b43 *extdata/README
24604bc9ec4790d5d590a623edea5548 *extdata/Sc.fa
1a6fe1b8caec191eb16265cc5b1d7563 *extdata/Sp.fa
11861abec072717c887a753e28f05f56 *extdata/dm3_upstream2000.fa.gz
cfea9d61b851d60768c0751e17ab9937 *extdata/fastaEx.fa
c4114941da5b3499beff7b3f87c84166 *extdata/hg18chr8_gap.txt
76897b4820e1ed23b787a171ae4d3b5a *extdata/hg18chrY_gap.txt
3f5e79e34a204b72bb52b2e5d2b79f19 *extdata/msx2_mRNA.aln
23770dfd9eb85ab715b4cc28268bbc42 *extdata/s_1_sequence.txt
6210f3d073b676bc7bed60172a72c3e3 *extdata/someORF.fa
2fc0b8e9625d6ebebf8fca9cb7737ebd *extdata/someORF.fa.gz
7dbff38241e7ac38c4345e17425c868a *help/AnIndex
d9e74ff458a5406931640b7022cfd6a7 *help/Biostrings.rdb
f77e03e7735ccd98076eca07a0c7816a *help/Biostrings.rdx
0e955d59225e197a7ff8eee6966515e8 *help/aliases.rds
2413b8e53fd6170aec713d2c888f1295 *help/paths.rds
5c66d6b3291758c12abe39f1dc4aef00 *html/00Index.html
0629445e5f3de06acbaf6e4013c7deca *html/R.css
62f25a5465e5e88a2c878faa8ef9fbb8 *include/Biostrings_defines.h
14ca556a6eb11b4ae18b470e8ab32301 *include/Biostrings_interface.h
e27db4c0e66fa6c49509cadf03b3616e *include/_Biostrings_stubs.c
dc24852a1564bb60dc2bd0ef8c5c1d51 *libs/i386/Biostrings.dll
3b84a9d9e491c5423eb89284b5ef11c4 *libs/x64/Biostrings.dll
f010aec2e4d0a98e0a1e40e62bae9871 *unitTests/test_MultipleAlignment.R
1437c2c15ae9d298a46c40bdc46455f9 *unitTests/test_XString.R
cedcf97df95ea2184ef767cc4da784a9 *unitTests/test_XStringSet.R
c4c1c9794d5d781a2ea6f15f2876bdb0 *unitTests/test_XStringSetList.R
c6fed7d62d87e8fd0fd23f978a072ba9 *unitTests/test_findPalindromes.R
5a4fe6582d86f20f68c627d1efd511c0 *unitTests/test_matchDNAPattern.R.FIXME
0371bd65424b6b0160dd18f537333cc0 *unitTests/test_matchPDict.R
c0eb2b2cdf92ba79057a643d052c98e3 *unitTests/test_pairwiseAlignment.R
407a2929d7f9fce74bd30e731a492477 *unitTests/test_twoWayAlphabetFrequency.R
