Illumina Ratv1 annotation data (chip illuminaRatv1)

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Documentation for package ‘illuminaRatv1.db’ version 1.24.0

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illuminaRatv1 Bioconductor annotation data package
illuminaRatv1.db Bioconductor annotation data package
illuminaRatv1ACCNUM Map Manufacturer identifiers to Accession Numbers
illuminaRatv1ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
illuminaRatv1ARRAYADDRESS Custom mappings added to the package
illuminaRatv1CHR Map Manufacturer IDs to Chromosomes
illuminaRatv1CHRLENGTHS A named vector for the length of each of the chromosomes
illuminaRatv1CHRLOC Map Manufacturer IDs to Chromosomal Location
illuminaRatv1CHRLOCEND Map Manufacturer IDs to Chromosomal Location
illuminaRatv1CODINGZONE Custom mappings added to the package
illuminaRatv1ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaRatv1ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaRatv1ENSEMBLREANNOTATED Custom mappings added to the package
illuminaRatv1ENTREZID Map between Manufacturer Identifiers and Entrez Gene
illuminaRatv1ENTREZREANNOTATED Custom mappings added to the package
illuminaRatv1ENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaRatv1ENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaRatv1fullReannotation Custom mappings added to the package
illuminaRatv1GENENAME Map between Manufacturer IDs and Genes
illuminaRatv1GENOMICLOCATION Custom mappings added to the package
illuminaRatv1GENOMICMATCHSIMILARITY Custom mappings added to the package
illuminaRatv1GO Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaRatv1GO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaRatv1GO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaRatv1listNewMappings Custom mappings added to the package
illuminaRatv1LOCUSID Map between Manufacturer Identifiers and Entrez Gene
illuminaRatv1MAPCOUNTS Number of mapped keys for the maps in package illuminaRatv1.db
illuminaRatv1NUID Custom mappings added to the package
illuminaRatv1ORGANISM The Organism information for illuminaRatv1
illuminaRatv1ORGPKG The Organism information for illuminaRatv1
illuminaRatv1OTHERGENOMICMATCHES Custom mappings added to the package
illuminaRatv1OVERLAPPINGSNP Custom mappings added to the package
illuminaRatv1PATH Mappings between probe identifiers and KEGG pathway identifiers
illuminaRatv1PATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
illuminaRatv1PMID Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaRatv1PMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaRatv1PROBEQUALITY Custom mappings added to the package
illuminaRatv1PROBESEQUENCE Custom mappings added to the package
illuminaRatv1REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
illuminaRatv1REPEATMASK Custom mappings added to the package
illuminaRatv1REPORTERGROUPID Custom mappings added to the package
illuminaRatv1REPORTERGROUPNAME Custom mappings added to the package
illuminaRatv1SECONDMATCHES Custom mappings added to the package
illuminaRatv1SECONDMATCHSIMILARITY Custom mappings added to the package
illuminaRatv1SYMBOL Map between Manufacturer Identifiers and Gene Symbols
illuminaRatv1SYMBOLREANNOTATED Custom mappings added to the package
illuminaRatv1TRANSCRIPTOMICMATCHSIMILARITY Custom mappings added to the package
illuminaRatv1UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
illuminaRatv1UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
illuminaRatv1UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
illuminaRatv1_dbconn Collect information about the package annotation DB
illuminaRatv1_dbfile Collect information about the package annotation DB
illuminaRatv1_dbInfo Collect information about the package annotation DB
illuminaRatv1_dbschema Collect information about the package annotation DB