Package: bumphunter
Version: 1.6.0
Title: Bump Hunter
Description: Tools for finding bumps in genomic data
Authors@R: c(person(c("Rafael", "A."), "Irizarry", role = c("cre","aut"), email = "rafa@jimmy.harvard.edu"),
             person("Martin", "Ayree", role = "aut"),
	     person(c("Kasper", "Daniel"), "Hansen", role = "aut"),
	     person(c("Hector", "Corrada"), "Hansen", role = "aut"),
	     person("Shan", "Andrews", role = "ctb"),
 	     person(c("Andrew", "E."), "Jaffe", role = "ctb"),
	     person("Harris", "Jaffee", role = "ctb"))
Depends: R (>= 2.10), S4Vectors, IRanges, GenomeInfoDb, GenomicRanges,
        foreach, iterators, methods, parallel, locfit
Suggests: RUnit, doParallel, org.Hs.eg.db,
        TxDb.Hsapiens.UCSC.hg19.knownGene
Imports: matrixStats, limma, doRNG, BiocGenerics, utils
Collate: AllGenerics.R annotateNearest.R dummyData.R
        limmaForPermutations.R regionFinder.R smooth.R bumphunter.R
        nearestgene.R fuzzy.match2.R matchGenes.R pointMatch.R
        known_transcripts.R dataframe_to.R utils.R
License: Artistic-2.0
LazyData: yes
URL: https://github.com/ririzarr/bumphunter
biocViews: DNAMethylation, Epigenetics, Infrastructure,
        MultipleComparison
Packaged: 2014-10-14 04:13:23 UTC; biocbuild
Author: Rafael A. Irizarry [cre, aut],
  Martin Ayree [aut],
  Kasper Daniel Hansen [aut],
  Hector Corrada Hansen [aut],
  Shan Andrews [ctb],
  Andrew E. Jaffe [ctb],
  Harris Jaffee [ctb]
Maintainer: Rafael A. Irizarry <rafa@jimmy.harvard.edu>
Built: R 3.1.1; ; 2014-10-14 06:44:14 UTC; windows
