![[R logo]](../../../doc/html/logo.jpg){kind=logo}
![[Up]](../../../doc/html/left.jpg){kind=small}
![[Top]](../../../doc/html/up.jpg){kind=small}
| ReactomePA-package | Reactome Pathway Analysis |
| ALLEXTID.Reactome | ALLEXTID.Reactome |
| cnetplot | cnetplot |
| DataSet | Datasets sample contains a sample of gene IDs. |
| enrichMap | enrichMap |
| enrichPathway | Pathway Enrichment Analysis of a gene set. Given a vector of genes, this function will return the enriched pathways with FDR control. |
| EXTID2TERMID.Reactome | EXTID2TERMID.Reactome |
| getGeneSet.Reactome | getGeneSet.Reactome |
| gseaplot | gseaplot |
| gsePathway | gsePathway |
| ReactomePA | Reactome Pathway Analysis |
| TERM2NAME.Reactome | TERM2NAME.Reactome |
| TERMID2EXTID.Reactome | TERMID2EXTID.Reactome |
| viewPathway | viewPathway |