Package: BSgenome
Title: Infrastructure for Biostrings-based genome data packages
Description: Infrastructure shared by all the Biostrings-based genome data
             packages 
Version: 1.34.1
Author: Herve Pages
Maintainer: H. Pages <hpages@fhcrc.org>
biocViews: Genetics, Infrastructure, DataRepresentation,
        SequenceMatching, Annotation, SNP
Depends: R (>= 2.8.0), methods, BiocGenerics (>= 0.1.2), S4Vectors (>=
        0.0.7), IRanges (>= 1.99.1), GenomeInfoDb (>= 1.1.4),
        GenomicRanges (>= 1.17.15), Biostrings (>= 2.33.3), rtracklayer
        (>= 1.25.8)
Imports: methods, stats, BiocGenerics, S4Vectors, IRanges, XVector,
        GenomeInfoDb, GenomicRanges, Biostrings, Rsamtools, rtracklayer
Suggests: BiocInstaller, BSgenome.Celegans.UCSC.ce2 (>= 1.3.11),
        BSgenome.Hsapiens.UCSC.hg19 (>= 1.3.11),
        BSgenome.Hsapiens.UCSC.hg19.masked,
        BSgenome.Rnorvegicus.UCSC.rn5, SNPlocs.Hsapiens.dbSNP.20100427,
        hgu95av2probe, Biobase, RUnit
License: Artistic-2.0
LazyLoad: yes
Collate: utils.R OnDiskNamedSequences-class.R SNPlocs-class.R
        InjectSNPsHandler-class.R BSgenome-class.R available.genomes.R
        injectSNPs.R getSeq-methods.R bsapply.R BSgenome-utils.R
        export-methods.R GenomeData-class.R GenomeDataList-class.R
        gdapply.R gdReduce.R BSgenomeForge.R
Packaged: 2014-12-29 02:57:29 UTC; biocbuild
Built: R 3.1.2; ; 2014-12-29 07:07:20 UTC; windows
