complete                Complete microbial genome dates
doublingTime            Doubling time for genome projects
enaExperiment           ENA SRA experiment details
enaFiles                ENA SRA submitted or fastq files
enaProject              ENA projects
enaSRA                  ENA sequence read archive
enaStudy                ENA SRA study details
enaSubmission           ENA SRA submission dates
enaTaxonomy             ENA taxonomy statistics
genomes                 Introduction to the genomes package
genomes-lines           Add lines to a genomes plot
genomes-plot            Genome table plots by release date
genomes-subset          Subset genome tables
genomes-summary         Genome table summaries
genomes-update          Genome table updates
genus                   Extract the genus name
image2                  Display a matrix image
lenvs                   Metagenome sequencing projects at NCBI
leuks                   Eukaryotic genome projects at NCBI
like                    Pattern matching using wildcards
lproks                  Microbial genome projects at NCBI
ncbiGenome              NCBI Genome Database
ncbiInfo                NCBI Entrez databases and fields
ncbiNucleotide          NCBI Nucleotide database
ncbiProject             NCBI BioProject database
ncbiPubmed              NCBI PubMed database
ncbiRelease             NCBI revision history
ncbiSubmit              NCBI submission dates
ncbiTaxonomy            NCBI taxonomy database
plotby                  Plot groups of genomes by release date
print.genomes           Print genome tables
pub                     Complete microbial genome publications
species                 Extract the species name
sra                     Microbial SRA samples at the ENA
table2                  Format and sort a contigency table
top                     Find the most common values
virus                   Virus genomes at NCBI
year                    Parse a date string
