Package: exomeCopy
Type: Package
Title: Detection of CNV in exome/targeted sequencing data
Version: 1.0.3
Date: 2011-09-16
Author: Michael Love
Maintainer: Michael Love <love@molgen.mpg.de>
Description: A hidden Markov model for the detection of copy number variants (CNV) in exome/targeted sequencing read depth data.  The package uses positional covariates, such as background read depth and GC-content, to simultaneously normalize and segment the samples into regions of constant copy count.
License: GPL (>= 2)
LazyLoad: yes
Depends: methods, graphics, IRanges, GenomicRanges, Rsamtools (>=
        1.4.3)
Suggests: Biostrings
biocViews: CopyNumberVariants, Sequencing, HighThroughputSequencing,
        Genetics
Packaged: 2012-03-21 07:23:21 UTC; biocbuild
Built: R 2.14.2; i386-pc-mingw32; 2012-03-21 10:52:18 UTC; windows
Archs: i386, x64
