![[R logo]](../../../doc/html/logo.jpg){kind=logo}
![[Up]](../../../doc/html/left.jpg){kind=small}
![[Top]](../../../doc/html/up.jpg){kind=small}
| biovizBase-package | biovizBase is a package which provides utilities and color scheme... |
| addSteppings | Adding disjoint levels to a GenomicRanges object |
| addSteppings-method | Adding disjoint levels to a GenomicRanges object |
| biovizBase | biovizBase is a package which provides utilities and color scheme... |
| blind.pal.info | Color blind safe palette generator |
| brewer.pal.blind.info | Color blind safe palette generator |
| colorBlindSafePal | Color blind safe palette generator |
| containLetters | Checking if string contains letters or not |
| darned_hg19_subset500 | Subset of RNA editing sites in hg19... |
| dichromat.pal.blind.info | Color blind safe palette generator |
| GCcontent | GC content computation for BSgenome |
| genBlindPalInfo | Color blind safe palette generator |
| genBrewerBlindPalInfo | Color blind safe palette generator |
| genDichromatPalInfo | Color blind safe palette generator |
| genesymbol | Gene symbols with position... |
| getBioColor | Color scheme getter for biological data |
| getIdeogram | Get ideogram. |
| hg19Ideogram | Hg19 ideogram without cytoband information... |
| hg19IdeogramCyto | Hg19 ideogram with cytoband information... |
| isIdeogram | Ideogram checking |
| isJunctionRead | Utils for Splicing Summary |
| isMatchedWithModel | Utils for Splicing Summary |
| isSimpleIdeogram | Simple ideogram checking |
| maxGap | Estimated max gaps |
| maxGap-method | Estimated max gaps |
| pileupAsGRanges | Summarize reads for certain region |
| pileupGRangesAsVariantTable | Mismatch summary |
| plotColorLegend | Show colors |
| showColor | Show colors |
| shrinkageFun | Shrinkage function |
| shrinkageFun-method | Shrinkage function |
| transformGRangesForEvenSpace | Transform GRanges with New Coordinates |
| transformGRangesToDfWithTicks | transformGRangesToDfWithTicks |