Package: VariantAnnotation
Type: Package
Title: Annotation of Genetic Variants
Description: Annotate variants with respect to location and amino acid coding 
Version: 1.0.5
Author: Michael Lawrence and Valerie Obenchain 
Maintainer: Valerie Obenchain <vobencha@fhcrc.org>
License: Artistic-2.0
biocViews: DataImport, Sequencing, HighThroughputSequencing, SNP,
        AnnotationData, Genetics, Homo_sapiens
Depends: methods, R (>= 2.8.0), GenomicRanges, Biostrings,
        AnnotationDbi, Rsamtools
Imports: AnnotationDbi, Biobase, BSgenome, GenomicFeatures, IRanges (>=
        1.11.17), snpStats, DBI
Suggests: RUnit, BSgenome.Hsapiens.UCSC.hg18,
        TxDb.Hsapiens.UCSC.hg18.knownGene,
        SNPlocs.Hsapiens.dbSNP.20090506,
        TxDb.Dmelanogaster.UCSC.dm3.ensGene,
        BSgenome.Dmelanogaster.UCSC.dm3, PolyPhen.Hsapiens.dbSNP131,
        SIFT.Hsapiens.dbSNP132
LazyLoad: yes
Packaged: 2011-11-16 08:28:18 UTC; biocbuild
Built: R 2.14.0; ; 2011-11-16 12:52:05 UTC; windows
